LOCUS BC070279 1121 bp mRNA linear HUM 09-SEP-2005
DEFINITION Homo sapiens ADAM metallopeptidase domain 18, mRNA (cDNA clone
IMAGE:6102258), complete cds.
ACCESSION BC070279
VERSION BC070279.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1121)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1121)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: h Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7656860
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1121
/db_xref="H-InvDB:HIT000264237"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6102258"
/tissue_type="Testis"
/clone_lib="NIH_MGC_82"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1121
/gene="ADAM18"
/gene_synonym="ADAM27"
/gene_synonym="tMDCIII"
/db_xref="GeneID:8749"
CDS 39..587
/gene="ADAM18"
/gene_synonym="ADAM27"
/gene_synonym="tMDCIII"
/codon_start=1
/product="ADAM18 protein"
/protein_id="AAH70279.1"
/db_xref="GeneID:8749"
/translation="MFLLLALLTELGRLQAHEGSEGIFLHVTVPRKIKSNDSEVSERK
MIYIITIDGQPYTLHLGKQSFLPQNFLVYTYNETGSLHSVSPYFMMHCHYQGYAAEFP
NSFVTLSICSGLRGFLQFENISYGIEPVESSARFEHIIYQMKNNDPNVSILAVNYSHI
WQKDQPYKVPLNSQVTVIILML"
BASE COUNT 361 a 194 c 175 g 391 t
ORIGIN
1 tctgtccttg gctgtggctc ctgcgctctg gctgagccat gttccttctc ctcgccctcc
61 tcactgagct tggaagactg caagcccacg aaggttctga aggaatattt ctgcatgtca
121 cagttccacg gaagattaag tcaaatgaca gtgaagtttc agagaggaag atgatttaca
181 tcattacaat tgatggacaa ccttacactc tacatctcgg aaaacaatca ttcttacccc
241 agaacttttt ggtttataca tataatgaaa ctggatcttt gcattctgtg tctccatatt
301 ttatgatgca ttgccattac caaggatatg ctgccgaatt tccaaattca tttgtgacac
361 tcagtatatg ttctggtctc aggggatttc tccagtttga aaatatcagt tatggaattg
421 aaccagtaga atcttcagca agatttgagc atataattta tcaaatgaaa aataatgatc
481 caaatgtatc cattttagca gtaaattaca gtcatatttg gcagaaagac cagccctaca
541 aagttccttt aaactcacag gtgactgtca tcattctgat gttatgacat actagaacat
601 tgcctgtgta gttttcttgt aaatcatgaa aggaatttag ttagctgttg agtaggaata
661 ttaaatttta tgtatttttc tacctttaaa taaaacattg aaacttcatc taaaatattt
721 ggaaagttac atatttcaag cttaatattt tatgatgtat tatgtaacat taatttttat
781 atttttttca aacaaaatga tactattgaa aaagtttaga aatgcagaaa gaacagagtc
841 actgttattc tagtaccttg gtaaaattac ttttaatatt ttgttatata tcttacatac
901 tacctgaaca tatctttcta aaatgcacag ccatttgcat gttgccagat gctcttaatt
961 tgctggtaga ctaggtatag aattcttgct ggcagtttct ttctttcagc actttgaata
1021 tttcaatcca tcaccatgtg gcctctgttt tttctgataa aaatattcta ttattcttat
1081 tgggaattcc ttaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//