LOCUS BC070243 630 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens interferon induced transmembrane protein 3 (1-8U),
mRNA (cDNA clone MGC:88228 IMAGE:30401041), complete cds.
ACCESSION BC070243
VERSION BC070243.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 630)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 630)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein and Dr. Miklos Palkovits
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: o Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11995467.
FEATURES Location/Qualifiers
source 1..630
/db_xref="H-InvDB:HIT000264201"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88228 IMAGE:30401041"
/tissue_type="Blood vessels- blood vessel, aorta, basilar
artery."
/clone_lib="NIH_MGC_187"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..630
/gene="IFITM3"
/gene_synonym="1-8U"
/db_xref="GeneID:10410"
/db_xref="HGNC:HGNC:5414"
/db_xref="MIM:605579"
CDS 36..437
/gene="IFITM3"
/gene_synonym="1-8U"
/codon_start=1
/product="interferon induced transmembrane protein 3
(1-8U)"
/protein_id="AAH70243.1"
/db_xref="GeneID:10410"
/db_xref="HGNC:HGNC:5414"
/db_xref="MIM:605579"
/translation="MNHTVQTFFSPVNSGQPPNYEMLKEEHEVAVLGAPHNPAPPTST
VIHIRSETSVPDHVVWSLFNTLFMNPCCLGFIAFAYSVKSRDRKMVGDVTGAQAYAST
AKCLNIWALILGILMTILLIVIPVLIFQAYG"
BASE COUNT 148 a 209 c 138 g 135 t
ORIGIN
1 agtaacccga ccgccgctgg tcttcgctgg acaccatgaa tcacactgtc caaaccttct
61 tctctcctgt caacagtggc cagcccccca actatgagat gctcaaggag gagcacgagg
121 tggctgtgct gggggcgccc cacaaccctg ctcccccgac gtccaccgtg atccacatcc
181 gcagcgagac ctccgtgccc gaccatgtcg tctggtccct gttcaacacc ctcttcatga
241 acccctgctg cctgggcttc atagcattcg cctactccgt gaagtctagg gacaggaaga
301 tggttggcga cgtgaccggg gcccaggcct atgcctccac cgccaagtgc ctgaacatct
361 gggccctgat tctgggcatc ctcatgacca ttctgctcat cgtcatccca gtgctgatct
421 tccaggccta tggatagatc aggaggcatc actgaggcca ggagctctgc ccatgacctg
481 tatcccacgt actccaactt ccattcctcg ccctgccccc ggagccgagt cctgtatcag
541 ccctttatcc tcacacgctt ttctacaatg gcattcaata aagtgcacgt gtttctgaat
601 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//