LOCUS BC070187 1357 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens CCR4-NOT transcription complex, subunit 7, mRNA (cDNA
clone MGC:88168 IMAGE:4738218), complete cds.
ACCESSION BC070187
VERSION BC070187.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1357)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1357)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: g Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34335233.
FEATURES Location/Qualifiers
source 1..1357
/db_xref="H-InvDB:HIT000264145"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88168 IMAGE:4738218"
/tissue_type="Prostate, adenocarcinoma."
/clone_lib="NIH_MGC_60"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1357
/gene="CNOT7"
/gene_synonym="hCAF-1"
/db_xref="GeneID:29883"
/db_xref="HGNC:HGNC:14101"
/db_xref="MIM:604913"
CDS 277..1134
/gene="CNOT7"
/gene_synonym="hCAF-1"
/codon_start=1
/product="CCR4-NOT transcription complex, subunit 7"
/protein_id="AAH70187.1"
/db_xref="GeneID:29883"
/db_xref="HGNC:HGNC:14101"
/db_xref="MIM:604913"
/translation="MPAATVDHSQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFP
GVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFN
LTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGY
DFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLEL
ERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGLGSGSSYVQNGTGNA
YEEEANKQS"
BASE COUNT 418 a 278 c 298 g 363 t
ORIGIN
1 gcgaaaagcg acggcgcagc acggtgcggc gcagctcctg ctcgcctttc ccttcgctgg
61 gcgagaggtg tctatggggc acccgctgcc gccgccgcta ccgccaccgc caccgccacc
121 gccgccgagt gctgtctcta tggcgaggag gaggaggagg agcgcgagct cagcgacaca
181 agtacataaa taaaggataa aatattttat gaaacaaatc ttcaatcaag tataacattt
241 tgatgcttgg catctagact cccttgtgcc ctcactatgc cagcggcaac tgtagatcat
301 agccaaagaa tttgtgaagt ttgggcttgc aacttggatg aagagatgaa gaaaattcgt
361 caagttatcc gaaaatataa ttacgttgct atggacaccg agtttccagg tgtggttgca
421 agacccattg gagaattcag gagcaatgct gactatcaat accaactatt gcggtgtaat
481 gtagacttgt taaagataat tcagctagga ctgacattta tgaatgagca aggagaatac
541 cctccaggaa cttcaacttg gcagtttaat tttaaattta atttgacgga ggacatgtat
601 gcccaggact ctatagagct actaacaaca tctggtatcc agtttaaaaa acatgaggag
661 gaaggaattg aaacccagta ctttgcagaa cttcttatga cttctggagt ggtcctctgt
721 gaaggggtca aatggttgtc atttcatagc ggttacgact ttggctactt aatcaaaatc
781 ctaaccaact ctaacttgcc tgaagaagaa cttgacttct ttgagatcct tcgattgttt
841 tttcctgtca tttatgatgt gaagtacctc atgaagagct gcaaaaatct caaaggtgga
901 ttacaggagg tggcagaaca gttagagctg gaacggatag gaccacaaca tcaggcagga
961 tctgattcat tgctcacagg aatggccttt ttcaaaatga gagaaatgtt ctttgaagat
1021 catattgatg atgccaaata ttgtggtcat ttgtatggcc ttggttctgg ttcatcctat
1081 gtacagaatg gcacagggaa tgcatatgaa gaggaagcca acaagcagtc atgacatgaa
1141 atagtccttt tatttttatt tcgagctaca cacatgcttg tatataggtt ttatctctgg
1201 ttgaatccct cgaacaatag acagtacctt tcccccccct ttcatggccc attttattgt
1261 ctgcctttca gtactaagta tgaccgttcc tatctcagat cttaataaaa agaaaaaaaa
1321 aaacgctaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
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