LOCUS BC070178 603 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens amyloid P component, serum, mRNA (cDNA clone
IMAGE:4723576), complete cds.
ACCESSION BC070178
VERSION BC070178.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 603)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 603)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: g Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18375514
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..603
/db_xref="H-InvDB:HIT000264136"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4723576"
/tissue_type="Liver"
/clone_lib="NIH_MGC_76"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..603
/gene="APCS"
/gene_synonym="PTX2"
/gene_synonym="SAP"
/db_xref="GeneID:325"
/db_xref="MIM:104770"
CDS 302..442
/gene="APCS"
/gene_synonym="PTX2"
/gene_synonym="SAP"
/codon_start=1
/product="APCS protein"
/protein_id="AAH70178.1"
/db_xref="GeneID:325"
/db_xref="MIM:104770"
/translation="MWDSVLPPENILSAYQGTPLPANILDWQALNYEIRGYVIIKPLV
WV"
BASE COUNT 166 a 130 c 146 g 161 t
ORIGIN
1 gggcatgaat atcagacgct agggggacag ccactgtgtt gtctgctacc ctcatcctgg
61 tcactgcttc tgctataaca gccctaggcc aggaatatga acaagccgct gctttggatc
121 tctgtcctca tcaggtattg ctgaattttg gatcaatggg acacctttgg tgaaaaaggg
181 tctgcgacag ggttactttg tggaagctca gcccaagatt gtcctggggc aggaacagga
241 ttcctatggg ggcaagtttg ataggagcca gtcctttgtg ggagagattg gggatttgta
301 catgtgggac tctgtgctgc ccccagaaaa tatcctgtct gcctatcagg gtacccctct
361 ccctgccaat atcctggact ggcaggctct gaactatgaa atcagaggat atgtcatcat
421 caaacccttg gtgtgggtct gaggtcttga ctcaacgaga gcacttgaaa atgaaatgac
481 tgtctaagag atctggtcaa agcaactgga tactagatct tacatctgca gctctttctt
541 ctttgaattt cctatctgta tgtctgccta attaaaaaaa aaaaaaaaaa aaaaaaaaaa
601 aaa
//