LOCUS BC070159 1062 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SMT3 suppressor of mif two 3 homolog 2 (S.
cerevisiae), mRNA (cDNA clone MGC:88139 IMAGE:6592382), complete
cds.
ACCESSION BC070159
VERSION BC070159.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1062)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1062)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: k Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54792068.
FEATURES Location/Qualifiers
source 1..1062
/db_xref="H-InvDB:HIT000264117"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88139 IMAGE:6592382"
/tissue_type="Testis"
/clone_lib="NIH_MGC_82"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1062
/gene="SUMO2"
/gene_synonym="HSMT3"
/gene_synonym="SMT3B"
/db_xref="GeneID:6613"
/db_xref="HGNC:HGNC:11125"
/db_xref="MIM:603042"
CDS 144..431
/gene="SUMO2"
/gene_synonym="HSMT3"
/gene_synonym="SMT3B"
/codon_start=1
/product="SMT3 suppressor of mif two 3 homolog 2 (S.
cerevisiae)"
/protein_id="AAH70159.1"
/db_xref="GeneID:6613"
/db_xref="HGNC:HGNC:11125"
/db_xref="MIM:603042"
/translation="MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLM
KAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGVY"
BASE COUNT 322 a 220 c 204 g 316 t
ORIGIN
1 gcacgacgtg cgcgcaccct ctcccctcgt ccaccgctgc cgcctccttc ttctgccgct
61 cctggtgctg cttgtgtgct cgtttggtgc ggacctggta cctcttttgt gaagcggcag
121 ctgaggagac tccggcgctc gccatggccg acgaaaagcc caaggaagga gtcaagactg
181 agaacaacga tcatattaat ttgaaggtgg cggggcagga tggttctgtg gtgcagttta
241 agattaagag gcatacacca cttagtaaac taatgaaagc ctattgtgaa cgacagggat
301 tgtcaatgag gcagatcaga ttccgatttg acgggcaacc aatcaatgaa acagacacac
361 ctgcacagtt ggaaatggag gatgaagata caattgatgt gttccaacag cagacgggag
421 gtgtctactg aaaagggaac ctgcttcttt actccagaac tctgttcttt aaagaccaag
481 attacattct caattagaaa actgcaattt ggttccacca catcctgact actaccgtat
541 agttttctct attctttcat ttcccccttc cccattcctt tattgtacat aaagtaactg
601 gtatatgtgc acaagcatat tgcatttttt ttttttttta actaaacagc caatggtatg
661 ttttgattga catcaagtgg agacgggatg gggaaaaata ctgattctgt gaaaataccc
721 cctttctcca ttagtggcat gctcattcag ctcttatctt tatattccag taagttattt
781 tgctctcact gttttaacaa aaaaaaaaac aacaacataa aaatccttgc ataccttgtt
841 caattggaga attttaatgt ttttcattta tcattgtaaa accaaggaca attttataac
901 ttttttgtac gtagctgtta catgtagggc aatctgtctt taagtaggga taaattactc
961 taaaacaaaa aagaatccta gatagttttc ccttcaagtc aagcgtcttg ttgtttaaat
1021 aaacttcttg ttcaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//