LOCUS BC070109 3622 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens chromosome 22 open reading frame 13, mRNA (cDNA clone
MGC:87632 IMAGE:4838028), complete cds.
ACCESSION BC070109
VERSION BC070109.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3622)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3622)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: i Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50845406.
FEATURES Location/Qualifiers
source 1..3622
/db_xref="H-InvDB:HIT000264067_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87632 IMAGE:4838028"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3622
/gene="C22orf13"
/gene_synonym="LLN4"
/gene_synonym="MGC1842"
/db_xref="GeneID:83606"
/db_xref="HGNC:HGNC:14237"
CDS 322..1041
/gene="C22orf13"
/gene_synonym="LLN4"
/gene_synonym="MGC1842"
/codon_start=1
/product="chromosome 22 open reading frame 13"
/protein_id="AAH70109.1"
/db_xref="GeneID:83606"
/db_xref="HGNC:HGNC:14237"
/translation="MRTEAEAAGPPLEPGDFVQLPVPVIQQLYHWDCGLACSRMVLRY
LGQLDDSEFERALQKLQLTRSIWTIDLAYLMHHFGVRHRFCTQTLGVDKGYKNQSFYR
KHFDTEETRVNQLFAQAKACKVLVEKCTVSVKDIQAHLAQGHVAIVLVNSGVLHCDLC
SSPVKYCCFTPSGHHCFCRTPDYQGHFIVLRGYNRATGCIFYNNPAYADRMCSTSISN
FEEARTSYGTDEDILFVYLDS"
BASE COUNT 781 a 1034 c 1035 g 772 t
ORIGIN
1 gggggttggg cgagagggtg gggccactca acgctgaggc ggcgaatggc cggagcagac
61 ttaaatcaag aggctgggga cctctaagat caaagtttgg ggcggggcct aaggaggggg
121 cggggcctcc agattcgaga cctggaaggg ctggggcggc gcttggggcg gcccagccgc
181 cgcctcccgt tctcccctcc gcagcggcgg cggtggcgga gaaggaactc gacacgcacc
241 gaccgccctc ccgccccagc cgaagcggaa gctgtagccc gctctgggcc ggggccatgg
301 gcgccccgcg ccgcccgggt catgaggacg gaggcggagg cagcggggcc gccgctcgag
361 cccggggact ttgtgcaact gcctgtgccc gtcatccagc agctctacca ctgggactgt
421 ggcctggcct gctccaggat ggtgctgcgg tacctgggcc agctggacga cagtgagttt
481 gagagagccc tgcagaagct gcagctgacc aggagcatct ggaccatcga cctggcctac
541 ctgatgcacc actttggcgt gaggcaccgc ttctgtaccc agaccctggg tgtcgacaag
601 ggctacaaga accagtcctt ctacaggaag cactttgaca cagaagagac ccgggtgaat
661 cagctgtttg cacaagcaaa ggcctgcaag gtgctggtgg agaaatgcac agtgagtgtg
721 aaggacatcc aggcgcacct ggctcagggc catgtggcca tcgtgctggt gaactcgggg
781 gtgctgcact gtgacctgtg ctccagccct gtcaagtact gctgcttcac ccccagtggc
841 caccactgct tctgccgcac tcctgactac cagggccact tcatcgtgct gcgtggctac
901 aaccgggcca ctggctgcat cttctacaac aacccagcct atgccgaccg aatgtgcagc
961 accagcatca gtaactttga ggaggccaga accagctatg gcacagatga ggacatcctc
1021 tttgtctact tggacagctg acagcaggag cctggtgcgc ctaggccctc ggaccccatc
1081 cccaccccag ccgggcccgc tcaggacgcc ctggcccagg cttggggctg ctggggttgg
1141 aatgtggaac tgcagcctca gcccatctgg cagagtccca ggaactcgga gactggcaca
1201 gctgctttgt ctgccagtgc cgtgtgttgt catgtcactc accccaagca cctgctggct
1261 gctggaagca taccccaaga ccccaagcct tgactccagc tgcgcccaca ggaagtccag
1321 tcccgacagt gcccttgttg cctttgagcc agatccatgg caatggtctc cccacagacc
1381 gcaggactga gcctggagag agaagttgct tgacggatgc cacttgtcag gacagtatgt
1441 gagtgtctgg agacagcata gctgacccca atcccccagg gctgaggacc cctccaggcc
1501 cctctctcct ggaagtgctg catatgcccc tgtgcccagt ggttgatgat accaccacca
1561 cctgcctacc catgggccca agtttctgtg gctcattaca gggcatctga cccctgccac
1621 ccagcataga cacacctcac agctgccctg ccatgcagag ccctggccgc tggagactct
1681 taaacccccc acagccctcc aggtcctcca gctctgtcag atggagggct ctcgggccta
1741 gatcccactg gtaggcctcg tggctggcag cagtgctctg ggaataaaca gctgccctag
1801 ccccagaggg atccctgcac ccaggaggcc tcctgacacc agccaaaatc ctgacagcag
1861 ggtctgccct cttgagtgtg gggagcccct agtcctttaa ggttggctgc taaggcctgt
1921 gctccaaagc aacgggctgg ggcagcctgc agctgcccac ccaacctggt cttcacacca
1981 gattgcacag gatactgggt cttgtctatc ttgatggaga agaggggttc ctgcccagga
2041 tcttacaaca cagcaagtag catagagctc tttccttcct cttttttggg gaggttgggg
2101 tcaggggttg tttctttgag atttaagttt tcatttttga ggggtaatca ccttcaagta
2161 aaacagtaat agcaagagtg aaggtacttt ggaaccacta acacctctgc acagggcagt
2221 tagccagctc aagttctttt tcagagaaag ggacttggcc agtggtttaa gtacctgccc
2281 cttcacctct cagacgaggc agctgacgag gcagctggcc cagtcttggg agtctgctca
2341 ggacagtggt ggagctgggt cttgaacccc agtctgcacc taaaaaacta aaggaaatgg
2401 attttttttt tttttttttg agacggagac tcactctgtt gcccagactg gagtgcagtg
2461 gcacgatctt ggcttactac aacctccgcc tcctgggttc aagcgatcct cctgcctcag
2521 ccccccacca gctgggacta caggcacatg ccaccatgcc cggctaattt ttttgtattt
2581 ttagtagaga ccaggcttcg ccatgttggc caggctggtc tcgaacccct gagctcaggt
2641 gatccacctg cctcggcctc ccaaagtggg aaatgggtca ttttcaaagg ggcaacagtg
2701 ataccatccc tgcactcctg ggtcctgctc ttccaatgcc caaggcatgg catggtggca
2761 gctgtgcccc cgctcattgc tttggagcac agatgactct gggggcagag gtgggctctg
2821 tttaggaggg cagtgagacc acccagccaa attgcttctc aaccctagac aaagcctttg
2881 gccaagaggg aggtgctgtt agttgggcag cccttctggg tttcagagac cggtgttggc
2941 tctagactgg tctcatctcc attgccttaa tgccaggtgg cccaggagta cccatgcaca
3001 gcagctgtgg ggtgtgggca tcttcaggtg gtgttctggt aaaatcgtta gaatagctgt
3061 atgaaggaaa ccagtgggag gaaatgaagt tttcaggatg gtgggatgtg atttagacag
3121 tgcacatgct gttagggctg tcactaggga gtggccttca tggagggtgg taacagcacc
3181 tcagtccagc caaaatgttt agaaacactc agtctctggt cccagaggat ggcttctcag
3241 ggcatgccac aagttaaagg tcaccttcct gaaagatgaa tgagaaagct gcccattctc
3301 aagactcatc tgcctaggga gggtcacaga ggcaggatgt aagacacact gtgttgcatt
3361 cttgcacaag tcatgaaaat ggagccagag agcctggaca tcagggactt ttgcccacag
3421 cacatgacac cgacagctgc ccagcctgtt cacatgctgg ggaccagcac agcacctgaa
3481 gccatgtggg acagttgggc tttgttcatt ctagccacgg ggatgaaagg gatcttttgc
3541 attgcagaga ttttatatat attttgtttg taatgagcca ttctcaataa acattattct
3601 cactgcaaaa aaaaaaaaaa aa
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