LOCUS BC070100 4067 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens arrestin domain containing 4, mRNA (cDNA clone
MGC:87545 IMAGE:30345612), complete cds.
ACCESSION BC070100
VERSION BC070100.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4067)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4067)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: n Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34419646.
FEATURES Location/Qualifiers
source 1..4067
/db_xref="H-InvDB:HIT000264058"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87545 IMAGE:30345612"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4067
/gene="ARRDC4"
/gene_synonym="FLJ36045"
/db_xref="GeneID:91947"
/db_xref="HGNC:HGNC:28087"
CDS 140..1396
/gene="ARRDC4"
/gene_synonym="FLJ36045"
/codon_start=1
/product="arrestin domain containing 4"
/protein_id="AAH70100.1"
/db_xref="GeneID:91947"
/db_xref="HGNC:HGNC:28087"
/translation="MGGEAGCAAAVGAEGRVKSLGLVFEDERKGCYSSGETVAGHVLL
EASEPVALRALRLEAQGRATAAWGPSTCPRASASAAALAVFSEVEYLNVRLSLREPPA
GEGIILLQPGKHEFPFRFQLPSEPLVTSFTGKYGSIQYCVRAVLERPKVPDQSVKREL
QVVSHVDVNTPALLTPVLKTQEKMVGCWFFTSGPVSLSAKIERKGYCNGEAIPIYAEI
ENCSSRLIVPKAAIFQTQTYLASGKTKTIRHMVANVRGNHIASGSTDTWNGKTLKIPP
VTPSILDCCIIRVDYSLAVYIHIPGAKKLMLELPLVIGTIPYNGFGSRNSSIASQFSM
DMSWLTLTLPEQPEAPPNYADVVPEEEFSRHIPPYPQPPNCEGEVCCPVFACIQEFRF
QPPPLYSEVDPHPSDVEESQPVSFIL"
BASE COUNT 1142 a 826 c 927 g 1172 t
ORIGIN
1 ggtgccccat cgggtaccgc acggctgccg cggcggcctt accctgccgc gagcgcctgt
61 gacagcggcg ccgctgtgct cgcgaccccg gctccgggcc tctgccgacc tcaggggcag
121 gaaagagtcg cccggcggga tgggcggcga ggctgggtgc gcggcggccg tgggtgccga
181 gggccgcgtg aagagcctgg gtctggtgtt cgaggacgag cgcaagggct gctattccag
241 cggcgagaca gtggccgggc acgtgctgct ggaggcgtcc gagccggtgg ccctgcgcgc
301 gctgcgcctg gaggcccagg ggcgcgccac cgccgcctgg ggcccgagca cctgcccccg
361 cgcctcggcc agcgccgcgg ccctggctgt cttctcggag gtggagtacc tgaacgtgcg
421 cctcagcctg cgggagcccc cggccggtga aggcatcatt ttattacagc ctggaaaaca
481 tgaatttcca tttcgctttc aacttccatc tgaacctttg gtcacctcgt ttactgggaa
541 atatggaagc attcagtact gtgtgcgggc agtgttggaa cgacccaagg tacctgatca
601 gagtgtaaag cgggaactcc aggttgttag tcatgtcgat gtcaacacac cagcattatt
661 aacccctgta ttgaaaactc aagagaaaat ggttggctgt tggtttttca cttctggtcc
721 agtctcgctg agtgccaaaa ttgaaagaaa gggatactgt aatggagaag ctattccaat
781 ctatgcagaa atagaaaatt gttcctctcg tctgattgtt ccaaaggctg ctattttcca
841 aacgcagaca tatttggcta gtggaaaaac aaagaccatt cgacacatgg tcgccaatgt
901 gcgaggaaac cacatcgctt ctgggagcac agacacatgg aatgggaaaa cgctaaaaat
961 cccacctgtt actccatcca tcctggattg ctgcattatc agagtggact attccttagc
1021 tgtatacatt cacattcctg gtgctaaaaa attgatgctc gaactgccat tagtgatcgg
1081 tacaattcca tataatggtt ttggcagcag aaactccagc attgccagcc agttcagtat
1141 ggatatgagc tggttgacac tgaccctgcc agagcagcct gaagcaccac caaattatgc
1201 agatgtggta ccagaggaag aattctctag acacattcct ccttaccctc aaccccctaa
1261 ctgtgaggga gaagtgtgct gtcctgtgtt tgcctgtata caagaattcc ggtttcaacc
1321 cccacctctt tattcagagg ttgacccaca tcctagcgac gtagaagaga gccagcctgt
1381 ttccttcatt ctctgaacgt atttcagaaa tcactgtgtt catcatcaaa ttagaatgtt
1441 ggttcttttc cttctgcctt tttgggagag agacaggaaa gattcacttg aaaacataaa
1501 tgaacgtcaa gactgaaggc aatagaaatt aaagaatgtg agaaagttct ggtgggccgg
1561 caggattgcc gcacaagttt atatgatggt cgtatatata tccctgttaa aaactgggat
1621 gaagatgtgc aaagtcacag aatgtaatgg aagtcctgat ggttacagag taagtgaaag
1681 ggtgcctgcg ctgacgtgag agaaaggaat ctgtaaacag tggaaacact gtgggagttt
1741 cccatggtgt tttgaagagt ggaacgaagg cgatatgaac tgaaggggtg aagacttgat
1801 tttggagagg gcaacaaaac aagggtgtgt gtgcatagga gaatggccca ctccaaatac
1861 gaagtgagat cctgagtctt tgggtgcttc atgatttcct accatattca ggcctaaaga
1921 cattgaaaaa gcatcttttc ttgagatcat ggtcatatga ggtcctaatg aagtactaca
1981 gttttcattc tttcaagggt agactaaaat atagtttata aatcggcagt acagtattat
2041 gaaaccaaga aagggtttct tgaaaagctt gtcggttcaa agaggaaaga tgaatttcaa
2101 tgtgaaaaca cgttttgttg agggctgtac tttttacccc ctttaagtgc tttaacagga
2161 tatacgtttg attttcctca tatcttattt acctaggagc atgtcagaga aagaagggag
2221 agaaaaggtt gcatctgcag gatgccttga taactacaca gtcccaaata aaaggccttt
2281 ttctaaccta cctctaatgg ggttatcaga tatgttttta aatctctcgc cctgagtact
2341 cttcttggga gttgctgctg tttacagcca cagtctcatc tatcactaaa tatgaaactg
2401 ggccaagggg aaaattcagt aagttagcgt taaatggaag taaatatatg tatacctaag
2461 agaatgtcaa aataaacacc aaaccaaaag aaggtaggag tgccattttt agaaaagaca
2521 caactttaat tcctgtcaag agacctaggt ctactgatgg cagtcactgc attgtacatt
2581 attccagttc ttcagtaatt ctgtttaaac tgtgattttc tttattgtgt tggtgcaata
2641 ttttattatc atttaacctc aggatattca gaccaacagg attgtgttgc tgctgaaagt
2701 ctgagcagtg ttttaccgtc cccagccccc ctcccacatg gtcacatgtt cacttgcttt
2761 tccttccatc tgttggtttt gtgagctgag agcatctctg gacacatgga agggagccag
2821 ggattcctgt gatacagatt ttgaaccagc agagtacttt ggttttcttc atgtcctaag
2881 ggtttgatcc agaaaccctg gtgcttcccc tgcagaatac tgtacttcat ttaacagaat
2941 gattgatttt tctttcaatc agcatgttca ccaaaaatag aaaagttctt ctaaggttaa
3001 attttgtatt taaaagttag ttggccattt gatcagggaa ttttctacac acattaggca
3061 aatgtatgct tttcatcctc tgggcttacc tctctcctct gcaatcctgg aagcattgtg
3121 catagttctt tcattgtaag ccgctattta aattcccaca atgcaaaact gttagaccag
3181 taattgtgct actgaaattg tcacaaaacg ttattccttg atttggtttt taaattttgc
3241 ttttgtgtgt gtgtctttaa acaggtaatg tgtatttaag tgttgtctaa acagttgatt
3301 tttactttag aaaagatcat cttcaactgt ttattgactt ctgagttata tagttcatgc
3361 cctgccaagg cattgttcga ctccatgata ctaaaacata atgaaagaaa caaactccag
3421 tatggagaag agaaagttta attatttggt tccatctaga aaagcaacaa cttaaaggaa
3481 tccttcacta ggattgtctt atcaccttta ttagataaat catgaagtgt ccctgtgaaa
3541 ttgaagtgaa actatctctg taggacttaa gagaatagct aaaaggcgtg acttgcctta
3601 ttgaactgat actggcatat ctgactgtaa gcagtaggtt gaagatatca ttttatgaat
3661 gtggagaatt ctacattgaa acagaaaata cctgggaatg aagattaaaa atgtagctgc
3721 tgttatttgc ttggtgattc ccctcttgct cttctttagt ttgaaaaaac aaaaacgtgg
3781 ccttggaatt ttcattttga tgcagaaatt ttgaaattga aaatgtgcat gttttggtgc
3841 acaaaatcct tctgtgggca aaactttgtt tttgttttgc acagtaagaa acaataggca
3901 agcgttatgt ttttggtaag ttaactatga aagctttctt atttttatta ttaaaaatgt
3961 aacaatttaa cccacaggaa aaaaaattac tttgtatgct tgtttgaacc ctatgggttc
4021 gttttattaa taaaattatt acactaaaaa agaaaaaaaa aaaaaaa
//