LOCUS BC070085 4116 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens colony stimulating factor 2 receptor, beta,
low-affinity (granulocyte-macrophage), mRNA (cDNA clone MGC:87425
IMAGE:30344148), complete cds.
ACCESSION BC070085
VERSION BC070085.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4116)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4116)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: m Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4559407.
FEATURES Location/Qualifiers
source 1..4116
/db_xref="H-InvDB:HIT000264043"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87425 IMAGE:30344148"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4116
/gene="CSF2RB"
/gene_synonym="CD131"
/gene_synonym="CDw131"
/gene_synonym="IL5RB"
/db_xref="GeneID:1439"
/db_xref="MIM:138981"
CDS 218..2887
/gene="CSF2RB"
/gene_synonym="CD131"
/gene_synonym="CDw131"
/gene_synonym="IL5RB"
/codon_start=1
/product="CSF2RB protein"
/protein_id="AAH70085.1"
/db_xref="GeneID:1439"
/db_xref="MIM:138981"
/translation="MVLAQGLLSMALLALCWERSLAGAEETIPLQTLRCYNDYTSHIT
CRWADTQDAQRLVNVTLIRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQS
FVVTDVDYFSFQPDRPLGTRLTVTLTQHVQPPEPRDLQISTDQDHFLLTWSVALGSPQ
SHWLSPGDLEFEVVYKRLQDSWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAP
GSRLSGRPSKWSPEVCWDSQPGDEAQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGL
FYKPSPDAGEEECSPVLREGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKS
SVNIQMAPPSLNVTKDGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETLQ
NAHSMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSWDTESVLPMWVLALIVI
FLTIAVLLALRFCGIYGYRLRRKWEEKIPNPSKSHLFQNGSAELWPPGSMSAFTSGSP
PHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDTTPAASDLPTEQP
PSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEPPQEGGSQKSPPPG
SLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLESGGGPAPPALGPR
VGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSGASSVSLVPSLGLPSDQ
TPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGRSPRSPRNNPVPPEAKSPVLNPGE
RPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRSKPSSPGPGPEIKNLDQAFQ
VKKPPGQAVPQVPVIQLFKALVVSVMSVGPPVP"
BASE COUNT 920 a 1201 c 1085 g 910 t
ORIGIN
1 gcctagaggc tccagaagaa gactggtctc tcccaccaca cagaggcctg gaggaggcag
61 aggccaggag ggagaggtcc caagagcctg tgaaatgggt ctggcctggc tcccagctgg
121 gcaggaacac aggacttcag gacactaagg accctgtcat gcccatggcc agcacccacc
181 agtgctggtg cctgcctgtc cagagctgac cagggagatg gtgctggccc aggggctgct
241 ctccatggcc ctgctggccc tgtgctggga gcgcagcctg gcaggggcag aagaaaccat
301 cccgctgcag accctgcgct gctacaacga ctacaccagc cacatcacct gcaggtgggc
361 agacacccag gatgcccagc ggctcgtcaa cgtgaccctc attcgccggg tgaatgagga
421 cctcctggag ccagtgtcct gtgacctcag tgatgacatg ccctggtcag cctgccccca
481 tccccgctgc gtgcccagga gatgtgtcat tccctgccag agttttgtcg tcactgacgt
541 tgactacttc tcattccaac cagacaggcc tctgggcacc cggctcaccg tcactctgac
601 ccagcatgtc cagcctcctg agcccaggga cctgcagatc agcaccgacc aggaccactt
661 cctgctgacc tggagtgtgg cccttgggag tccccagagc cactggttgt ccccagggga
721 tctggagttt gaggtggtct acaagcggct tcaggactct tgggaggacg cagccatcct
781 cctctccaac acctcccagg ccaccctggg gccagagcac ctcatgccca gcagcaccta
841 cgtggcccga gtacggaccc gcctggcccc aggttctcgg ctctcaggac gtcccagcaa
901 gtggagccca gaggtttgct gggactccca gccaggggat gaggcccagc cccagaacct
961 ggagtgcttc tttgacgggg ccgccgtgct cagctgctcc tgggaggtga ggaaggaggt
1021 ggccagctcg gtctcctttg gcctattcta caagcccagc ccagatgcag gggaggaaga
1081 gtgctcccca gtgctgaggg aggggctcgg cagcctccac accaggcacc actgccagat
1141 tcccgtgccc gaccccgcga cccacggcca atacatcgtc tctgttcagc caaggagggc
1201 agagaaacac ataaagagct cagtgaacat ccagatggcc cctccatccc tcaacgtgac
1261 caaggatgga gacagctaca gcctgcgctg ggaaacaatg aaaatgcgat acgaacacat
1321 agaccacaca tttgagatcc agtacaggaa agacacggcc acgtggaagg acagcaagac
1381 cgagaccctc cagaacgccc acagcatggc cctgccagcc ctggagccct ccaccaggta
1441 ctgggccagg gtgagggtca ggacctcccg caccggctac aacgggatct ggagcgagtg
1501 gagtgaggcg cgctcctggg acaccgagtc ggtgctgcct atgtgggtgc tggccctcat
1561 cgtgatcttc ctcaccatcg ctgtgctcct ggccctccgc ttctgtggca tctacgggta
1621 caggctgcgc agaaagtggg aggagaagat ccccaacccc agcaagagcc acctgttcca
1681 gaacgggagc gcagagcttt ggcccccagg cagcatgtcg gccttcacta gcgggagtcc
1741 cccacaccag gggccgtggg gcagccgctt ccctgagctg gagggggtgt tccctgtagg
1801 attcggggac agcgaggtgt cacctctcac catagaggac cccaagcatg tctgtgatcc
1861 accatctggg cctgacacga ctccagctgc ctcagatcta cccacagagc agccccccag
1921 cccccagcca ggcccgcctg ccgcctccca cacacctgag aaacaggctt ccagctttga
1981 cttcaatggg ccctacctgg ggccgcccca cagccgctcc ctacctgaca tcctgggcca
2041 gccggagccc ccacaggagg gtgggagcca gaagtcccca cctccagggt ccctggagta
2101 cctgtgtctg cctgctgggg ggcaggtgca actggtccct ctggcccagg cgatgggacc
2161 gggacaggcc gtggaagtgg agagaaggcc gagccagggg gctgcaggga gtccctccct
2221 ggagtccggg ggaggccctg cccctcctgc tcttgggcca agggtgggag gacaggacca
2281 aaaggacagc cctgtggcta tacccatgag ctctggggac actgaggacc ctggagtggc
2341 ctctggttat gtctcctctg cagacctggt attcacccca aactcagggg cctcgtctgt
2401 ctccctagtt ccctctctgg gcctcccctc agaccagacc cccagcttat gtcctgggct
2461 ggccagtgga ccccctggag ccccaggccc tgtgaagtca gggtttgagg gctatgtgga
2521 gctccctcca attgagggcc ggtcccccag gtcaccaagg aacaatcctg tcccccctga
2581 ggccaaaagc cctgtcctga acccagggga acgcccggca gatgtgtccc caacatcccc
2641 acagcccgag ggcctccttg tcctgcagca agtgggcgac tattgcttcc tccccggcct
2701 ggggcccggc cctctctcgc tccggagtaa accttcttcc ccgggacccg gtcctgagat
2761 caagaaccta gaccaggctt ttcaagtcaa gaagccccca ggccaggctg tgccccaggt
2821 gcccgtcatt cagctcttca aagccctagt tgtctcagtg atgtctgtgg gacctccagt
2881 cccttgagac cccacgtcat gtagagaagt taacggccca agtggtgggc aggctggcgg
2941 gacctgggga acatcaggag aggagtccag agcccacgtc tactgcggaa aagtcagggg
3001 aaactgccaa acaaaggaaa atgccccaaa ggcatatatg ctttagggcc tttggtccaa
3061 atggcccggg tggccactct tccagataga ccaggcaact ctccctccca ccggccacag
3121 atgaggggct gctgatctat gcctgggcct gcaccaggga ttatggttct tttaaatctt
3181 tgcctttcag atacaggaaa aataatggca ttaaattgct ttaatttgca ttattttagt
3241 tatccagttt gcacatattt ttataggtat cttaggcatc gattggtatt ttttaactgg
3301 gccaagccca ttaaggtctt tcttctgttg ggtgctatca ttttctgatt aagtcttttt
3361 gactattgac atacagtctt tcacagatgg tggagtgttt ttcccccaaa tctgttgttt
3421 gtcttataat gttgtatatg aggttttatg gtgtatgaat atgaatgctt ctgtaatgtc
3481 aaacagatcc ctagtaaact ccttcttcac ttttactgtc agatttacaa aggtcctccc
3541 attgcaaagc agtgtttgtc ctaatttata tattgttttt ctagttcatt ttgtgtttcc
3601 aacttttcat gtaaaatttt aattattttt gaatgtgtgg atgtgagact gaggtgcctt
3661 ttggtactga aattcttttt ccatgtacct gaagtgttac ttttgtgata taggaaatcc
3721 ttgtatatat actttattgg tccctaggct tcctattttg ttaccttgct ttctctatgg
3781 catccaccat tttgattgtt ctacttttat gatatgtttt cataagtggt taagcaagta
3841 ttctcgttac ttttgctctt aaatccctat tcattacagc aatgttggtg gtcaaagaaa
3901 atgataaaca acttgaatgt tcaatggtcc tgaaatacat aacaacattt tagtacattg
3961 taaagtagaa tcctctgttc ataatgaaca agatgaacca atgtggatta gaaagaagtc
4021 cgagatatta attccaaaat atccagacat tgttaaaggg aaaaaattgc aataaaatat
4081 ttgtaacata aaaaaaaaag aaaaaaaaaa aaaaaa
//