LOCUS BC070068 5638 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens headcase homolog (Drosophila), mRNA (cDNA clone
MGC:87326 IMAGE:30340910), complete cds.
ACCESSION BC070068
VERSION BC070068.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5638)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5638)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: l Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 66933006.
FEATURES Location/Qualifiers
source 1..5638
/db_xref="H-InvDB:HIT000264026"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87326 IMAGE:30340910"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..5638
/gene="HECA"
/gene_synonym="dJ225E12.1"
/gene_synonym="HDC"
/gene_synonym="HDCL"
/gene_synonym="HHDC"
/db_xref="GeneID:51696"
/db_xref="HGNC:HGNC:21041"
/db_xref="MIM:607977"
CDS 294..1925
/gene="HECA"
/gene_synonym="dJ225E12.1"
/gene_synonym="HDC"
/gene_synonym="HDCL"
/gene_synonym="HHDC"
/codon_start=1
/product="headcase homolog (Drosophila)"
/protein_id="AAH70068.1"
/db_xref="GeneID:51696"
/db_xref="HGNC:HGNC:21041"
/db_xref="MIM:607977"
/translation="MPNPKNSKGGRKNKRANSSGDEQENGAGALAAAGAAGAAAGGAL
AAAAGCGAAAAGAPGAGGAAGAGGAGTGAANAAAAAGAAAAGDAKNEAPCATPLICSF
GRPVDLEKDDYQKVVCNNEHCPCSTWMHLQCFYEWESSILVQFNCIGRARSWNEKQCR
QNMWTKKGYDLAFRFCSCRCGQGHLKKDTDWYQVKRMQDEKKKKSGSEKNTGRPPGEA
AEEAKKCRPPNKPQKGPSHDLPRRHSMDRQNSQEKAVGAAAYGARSPGGSPGQSPPTG
YSILSPAHFSGPRSSRYLGEFLKNAIHLEPHKKAMAGGHVFRNAHFDYSPAGLAVHRG
GHFDTPVQFLRRLDLSELLTHIPRHKLNTFHVRMEDDAQVGQGEDLRKFILAALSASH
RNVVNCALCHRALPVFEQFPLVDGTLFLSPSRHDEIEYDVPCHLQGRLMHLYAVCVDC
LEGVHKIICIKCKSRWDGSWHQLGTMYTYDILAASPCCQARLNCKHCGKPVIDVRIGM
QYFSEYSNVQQCPHCGNLDYHFVKPFSSFKVLEAY"
BASE COUNT 1485 a 1176 c 1365 g 1612 t
ORIGIN
1 ggagacccgc cttttccctc cggctcggga gcgtctcgct tgcgccccgg gcccgcggcg
61 cccgcgcggc tgcgagcctc gggtggccgc gtgccggctc caggaagccg gagagggcgc
121 ggcggccagg atggcgcggc acgggccgtg cggctagacg ggagccgagg gaaccgccgg
181 ctcgcgccct ccgttctttc ccggagccgg cttcacgcag ggccgggaac ggccgtgcct
241 ctgggatccg ccttcgctga cgccgggcac ctacctggac gcgagcgagc gagatgccca
301 accccaaaaa cagcaaaggc ggccgcaaaa acaagcgcgc caacagcagc ggcgacgagc
361 aggaaaatgg agccggggcc ctggcagcgg cgggcgcggc gggagcggcg gccggggggg
421 ccctggcggc agcggccggt tgcggggcgg cggcggcggg cgcgccgggc gccggaggcg
481 cggcgggcgc cggaggcgcg gggactggcg ccgcgaacgc tgcggccgcc gcgggggctg
541 cggccgcggg cgatgccaaa aacgaagccc catgtgccac tcccctgatc tgcagcttcg
601 gtaggccggt ggacctggag aaggacgact accagaaggt ggtgtgcaac aacgagcact
661 gcccctgcag cacctggatg cacctgcagt gcttctacga gtgggagagc agcatcctcg
721 tccagttcaa ctgcatcggc cgcgcgcgca gctggaacga gaagcaatgc cgccagaaca
781 tgtggacaaa gaagggctac gacctggcct tccgcttctg ctcttgccgc tgtggccagg
841 gccacttgaa gaaggacaca gactggtatc aggtgaagcg gatgcaggac gagaaaaaga
901 agaagtctgg ctccgagaag aacacaggga ggcctcctgg tgaggcggcg gaggaggcaa
961 aaaagtgcag gcccccaaat aagccccaga aaggcccaag ccacgacctc ccccgccggc
1021 attccatgga ccggcagaac tcccaggaga aggcagtggg tgccgcagcc tacggtgccc
1081 gttcccccgg tggctccccg ggccagtccc cacccacggg ctactccatc ctctctcctg
1141 cccacttcag cggcccccgc tcctccagat acctcgggga gttcttaaag aacgccatcc
1201 atctggagcc tcacaagaag gccatggctg ggggccatgt gttcagaaat gcccactttg
1261 attacagccc tgcggggttg gcagttcaca gggggggaca cttcgacacc cccgtgcagt
1321 tccttcggcg gctggacctc tccgaactcc tcactcacat ccccaggcat aagctgaaca
1381 ctttccacgt gcgcatggaa gacgatgccc aagtgggcca gggggaagac ttgcggaagt
1441 tcattctggc cgcgctcagt gccagccaca gaaacgtggt aaactgtgcc ctgtgccacc
1501 gggcgctccc ggtgttcgaa cagttcccac tggtggatgg aactttgttc ctaagcccgt
1561 cgagacatga tgagatcgaa tatgatgttc cttgtcacct tcaagggaga ctcatgcatc
1621 tgtatgccgt gtgcgtggac tgcctggaag gggttcacaa gatcatctgc atcaagtgta
1681 agtcacggtg ggatggcagc tggcaccagc tgggcactat gtacacctac gacatcctgg
1741 ctgcctctcc atgttgtcag gcccgcctga actgtaagca ctgtgggaag ccggtgatcg
1801 acgtgaggat cgggatgcag tacttctccg aatatagcaa cgtccagcag tgtccacact
1861 gtgggaacct ggactaccac ttcgtgaagc cattttcctc cttcaaagtt ctcgaagctt
1921 attgatgaaa gctttgcttt agtaatagct attttattga tattattact ttattacata
1981 tcttttatag ggaaacattc tgtgacatta atttcctttc taatttaaag gagagttact
2041 ttgttgtatg tgtgccacta aaataggggc tgcccttgcc ctgtcttgat tcccgagtgt
2101 taatctgtgg ttttgaccag agcccagatg ggtaatcctg tgcatttggg ttggggttca
2161 ctcttaccaa gaatctttga tgcagcttta agatggtggg gaggatgggg tgaatttagg
2221 aaaggaattt gtggttataa actaagagct tgataggagt tggaaggaaa ctcttactaa
2281 aatgttaact ttctaaaaac cttcttttag atcttccttg ggcctttgga aaaatatgtg
2341 acaagtgaat gtaagtctgt gcctggagag ctaatagtgc attagtctat ctcagcctag
2401 tgttctgcag cacacatggg caggcagttt actcacactg acaggtgacc tgaaagtggc
2461 acaagtgctg tttctatcac tattgtaatt tgccagttca tttttcatgc tgaaagtaat
2521 atccaaattg taagacatat gaaagatatt agtgttgcaa atatgtttag gtaaactgac
2581 ctataacaga atatgtgaaa tgaatttgga aataatgcaa gaaggcagaa ctcaatcatt
2641 taaattgtgt ctttgaagtt ggtaatatag cttttaagga gaacccatga ataacctgat
2701 ttgggcagtg atgatttatt acaggttgca ctgttgaagt gtcatttggt gtcaggttct
2761 tctcacaggt aaatctttca gccacagaat ctaactggtg agcttcagaa ccaataattg
2821 ccacatttat tgtcctcaaa attgcttatg gccatgttta accaattaat tctgagtttc
2881 caaaatcaaa gatttgacct taagagggaa gggaaaaaag tgtgaaagga tgatgaagaa
2941 aataatttta ctatttcttt taaaagtatg ttttggaaaa tcaatgattt taatgcatag
3001 cagtatgttt gaaaaataga ccattctaaa aagcccatga taccttactg ttgatgaaaa
3061 aggatgatca tatatataga acttgattag tcagagcatt gggcattcca aaatacagcc
3121 tttggttcag tagattttaa tgctttaaat agactgacgt cgcataccct tatagaattg
3181 gaatatgatt tctcaaaaat taatttgata atttcatgta tgatgtgcat atatgctaaa
3241 agaatgcaga aaatcatttt atgaatagcc aaatttgggg ttgatgtgaa cattttatgt
3301 tactcatttg gtttatactt tttttttttt ttttttttaa ctgtgtggtt tttcttttca
3361 gaagtattta ggcaatattg cacgtgagtt tcagttcttt ttttcttttt tttgagatgg
3421 agtctcactc ttgtcaccca ggctggagtg cagtagtgcg atctcagctc actgcaacct
3481 ctgcctcctg gattcaagcg attctcctgt cccagcctcc caggtagctg ggactatagg
3541 cacgtgccac cacacccggc taattttttg tatttttagt agagacagcg tttcaccatg
3601 ttagctagga tggtctagat ctcctgacct tgtgatctgc ctgcctcggc ctcccaaagt
3661 gctgggatta caggcgtgag tcactgtgcc tggccaagtt tcagttctat atgaagtatt
3721 tgatgttttg tttgaaacaa tacagcatta aagaaccaat gttattcact aatatcattc
3781 atctttcagt ttggatgatt tggtttgctg catctaggtt ggtgtttgat catctgaaaa
3841 aacatttcag tgggaagaaa tgcataaaat gcctataaga agtagaaagt cattgaactg
3901 acagtgtttg atgcaactaa aagaggattg taagacatag ctttctgcaa acttgtcttt
3961 aatgcacaaa gctgtagtgg tgaattaact atctccttat tgattctctc ctgtacccag
4021 atgcaaaaag tgctaagttt ctcttgtcct cgtaatacca tttggatttt atttctgaat
4081 ttaaatagta aaatatttat gatgctgatc tttaacccac ctaaaatttt atagtgaaac
4141 ctgctttata ttgttgttct gaagcttaca attgacctat acattgcatt cagcaagctc
4201 ctgaatttag aactgccgtc agtgtagtgt atgctgtgtt ccatgttgcc tttttagatg
4261 gctttctacc ccctgaacaa taaataggat gaggttttac tgtaattggg taaagtttac
4321 tcttggacat tatttcgatg ctaaagtaag gattctgtgg atgttactta aagagaaaag
4381 cataagagca tgaagcatat ctgggaatat cttttgcctt taagacgatt cattcttgtc
4441 tagagggaaa atctggctga tttgggaata aaatataatc gaatattcaa caccatgaag
4501 ataaatctta ttttggaaat ctactgacct taatacccca agcttgccct gaatactttg
4561 attggaattg gaatatatca aaaaaggtta gtatttttgt tgtagttagg atactaaaag
4621 gatattagtt acccaagaga tccaatttgt ttttctgatg aatagtgttc agtaaaatga
4681 agcagtctta agagtgacta ataatttcaa agtgattttt cgtctattct taatattttt
4741 taattattta tttttaagag ttttatacct tgagcagata caatgatctg ctttagtgag
4801 aggacaattt ctgattgatt gttttctctt caggccatct cacctcttca ttctcttgtt
4861 acatttgaag cagttgatat aatgggttta tactttaaaa gatagacatg gtgccatgaa
4921 gttgggaagt tgggtgaatt atcccattct agttacagag gagctttcct taaatgccct
4981 ttaacttcta ggttttgttc aagaagttca ttttctgagt aaaagttatt ttcatatatg
5041 ttgggggaaa attaactcat ctaaaaagaa tcttattagg tatttgaact ctaaaactaa
5101 cagataagac agatatgtac cttattagag caccagaact aatttgctaa gtcttttgtt
5161 tagtcctgca agactgatgc ttaatacaca gtctgttctc ctgtgtctag gtcaggaact
5221 ccagtttgct tttctgtttt gtgtcctggt agcagctgtt gagtaacttt cattggaggt
5281 tgggaaggaa gtgaggagaa agtgttcttg tttagtgttt tatttcctat aataggatgc
5341 tgcctaaccc agttcatctc tatgtcctgt tcactgaata ttccgggtaa ttgaaagaaa
5401 atataatgga tgggctccat taaaaccagc tcaaaaataa attcttgtca gtaaagattt
5461 cttgtcaaga tgtcttggat tgcacttttg ttgaggaaag acagtgtaaa tagttaaaga
5521 atgttgataa aattgaaaca tttggttgtg gaattgtgtg tggttttaga gggtttctgt
5581 ttgtgaaatg tatgtattaa aaataataaa attccagaaa ctaaaaaaaa aaaaaaaa
//