LOCUS BC070049 4054 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens LanC lantibiotic synthetase component C-like 2
(bacterial), mRNA (cDNA clone MGC:87139 IMAGE:30343188), complete
cds.
ACCESSION BC070049
VERSION BC070049.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4054)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4054)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: m Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50593015.
FEATURES Location/Qualifiers
source 1..4054
/db_xref="H-InvDB:HIT000264007"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87139 IMAGE:30343188"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4054
/gene="LANCL2"
/gene_synonym="MGC87139"
/gene_synonym="TASP"
/db_xref="GeneID:55915"
/db_xref="HGNC:HGNC:6509"
CDS 275..1627
/gene="LANCL2"
/gene_synonym="MGC87139"
/gene_synonym="TASP"
/codon_start=1
/product="LanC lantibiotic synthetase component C-like 2
(bacterial)"
/protein_id="AAH70049.1"
/db_xref="GeneID:55915"
/db_xref="HGNC:HGNC:6509"
/translation="MGETMSKRLKLHLGGEAEMEERAFVNPFPDYEAAAGALLASGAA
EETGCVRPPATPDEPGLPFHQDGKIIHNFIRRIQTKIKDLLQQMEEGLKTADPHDCSA
YTGWTGIALLYLQLYRVTCDQTYLLRSLDYVKRTLRNLNGRRVTFLCGDAGPLAVGAV
IYHKLRSDCESQECVTKLLQLQRSVVCQESDLPDELLYGRAGYLYALLYLNTEIGPGT
VCESAIKEVVNAIIESGKTLSREERKTERCPLLYQWHRKQYVGAAHGMAGIYYMLMQP
AAKVDQETLTEMVKPSIDYVRHKKFRSGNYPSSLSNETDRLVHWCHGAPGVIHMLMQA
YKVFKEEKYLKEAMECSDVIWQRGLLRKGYGICHGTAGNGYSFLSLYRLTQDKKYLYR
ACKFAEWCLDYGAHGCRIPDRPYSLFEGMAGAIHFLSDVLGPETSRFPAFELDSSKRD
"
BASE COUNT 1054 a 964 c 1018 g 1018 t
ORIGIN
1 gcgagcgagc ccgctcctct ccgtcgggag cagggcaaag gcgccaggaa cagggcagag
61 gcacagcgcc caccgcctct gcagccgcct gatgtgcgag cagcccgcga cgaggcagtg
121 cacgctcaga cgccccgctc ctcccgccag cgcgcggcct cgctcctcct agaggacgct
181 ctctgcgcgg gccctcggag gaggcggcgg cggggcgagc tgcagcgccg ggacaggagg
241 tttgtccccg cccgcgcgcc gtaccgcggc ggagatgggc gagaccatgt caaagaggct
301 gaagctccac ctgggagggg aggcagaaat ggaggaacgg gcgttcgtca accccttccc
361 ggactacgag gccgccgccg gggcgctgct cgcctccgga gcggccgaag agacaggctg
421 tgttcgtccc ccggccaccc cggatgagcc cggcctccct tttcatcagg acgggaagat
481 cattcataat ttcataagac ggatccagac caaaattaaa gatcttctgc agcaaatgga
541 agaagggctg aagacagctg atccccatga ctgctctgct tatactggct ggacaggcat
601 agcccttttg tacctgcagt tgtaccgggt cacatgtgac caaacctacc tgctccgatc
661 cctggattac gtaaaaagaa cacttcggaa tctgaatggc cgcagggtca ccttcctctg
721 tggggatgct ggccccctgg ctgttggagc tgtgatttat cacaaactca gaagtgactg
781 tgagtcccag gaatgtgtca caaaactttt gcagctccag agatcggttg tctgccaaga
841 atcagacctt cctgatgagc tgctttatgg acgggcaggt tatctgtatg ccttactgta
901 cctgaacaca gagataggtc caggcaccgt gtgtgagtca gctattaaag aggtagtcaa
961 tgctattatt gaatcgggta agactttgtc aagggaagaa agaaaaacgg agcgctgccc
1021 gctgttgtac cagtggcacc ggaagcagta cgttggagca gcccatggca tggctggaat
1081 ttactatatg ttaatgcagc cggcagcaaa agtggaccaa gaaaccttga cagaaatggt
1141 gaaacccagt attgattatg tgcgccacaa aaaattccga tctgggaatt acccatcatc
1201 attaagcaat gaaacagacc ggctggtgca ctggtgccac ggcgccccgg gggtcatcca
1261 catgctcatg caggcgtaca aggtctttaa ggaggagaag tacttgaaag aggccatgga
1321 gtgtagcgat gtgatttggc agcgaggttt gctgcggaag ggctacggga tatgccatgg
1381 gactgctggc aacggctatt ccttcctgtc cctttaccgt ctcacgcagg ataagaagta
1441 cctctaccga gcttgcaagt ttgcagagtg gtgtctagat tacggagcac acgggtgccg
1501 cattcctgac agaccctatt cgctctttga aggcatggct ggcgctattc actttctctc
1561 tgatgtcctg ggaccagaga catcacggtt tccagcattt gaacttgact cttcgaagag
1621 ggattaaaag gtgcaaaaag acaactaaaa tacccatttg gaccaaaagc cgccagattg
1681 cttagtgcct gacacagaaa caactgggaa tcctgaaaga gaagcagaca ccgtcacagg
1741 cccctctggt tagactagca tgagtgaccg aagccatcca tcaacatttt ctaacagcac
1801 cctcatcaat ataaaatatg acttcttcac atacagattc tctgtagtgt ttgcatgttt
1861 cttggtgttt gttgtctcca ggtgtaagct gttttaaatg gaaggccctt ctattcctga
1921 gggctcagag ctgaccatgc atgaatgtat ggcagtgtcc acttttctgt ataaaatgta
1981 taaagtgggg tttcttccat attgacaaat gagggaacag gtggtgtcta tcttgtatat
2041 cagaaagatt atctagggtc tatcctagtg ataatacatt gtcagccttt tctgtggcac
2101 cttccagatg agaatgaggg agcgaccact ccaaggacgg acaggaccag cagttctgca
2161 ggggcgtgct ggggtggttt gggagtgcac agctgaacgc ttcctgtttg gattttacac
2221 tcaccttcgt gttttaaaga agcctcagag tgcactgcag ctctgtcagg gccccattcc
2281 cagcagaggc ttcaggtgct ttgtgtagag tccagggcag ctggagcttt gttggggaga
2341 cttctggacc caaagggagc tttcccaaga agcctttgat ggccacactg taggcagcag
2401 tgactaagca ctggcagttc cagaacattt acccaggtat atgttactaa aacaggctcc
2461 acctcagttt atcaacatta taagttactg ttctaagaaa agtaaataca gttccagatg
2521 ggttattgca gattaacaga aagacactca actggactca tgtccctgca attaaactta
2581 cttcaacctt ttggaaagtt atcaaaatct aaatttggaa tgaatgcatt tcctattttt
2641 tgtctacttt tgggtgataa aaagtactag cccttattta tagatatgag aaacataatg
2701 ttctaaccaa caacattatg gtatttgtgt gacttttatt tgaaaaaatg tgagcagtaa
2761 tttgggttag cctaccttca ttaattctat cacatagatt tcagttttta gaagggtttc
2821 tgtcatcatg gaagaggtgg tctgggacta ggtacttctc gtcttgtgag ctaaggcttg
2881 tgtcatgaaa gacaagaggc ctctcttaac agcccagtcc ttgtctgcag ggggaggcct
2941 gagcatttcc cagccccagt gtccacacct ctcagaaaag agaaaaaaga atgtcagttt
3001 aggagaaaag cttccttttt acttgtgtgg ttatgtgtgg ggctggcacc cgaaatgtgt
3061 gacattcagc ttctaaacga tgcctggaga gtctgtttgc tgcagacacc cttgctcctg
3121 agtcattatt ttctttcatg ttagattgat gacttctgtg aatagaaatc atcctgatcc
3181 tattttacct ggcctccagg gcctgttgat gggctttgca ggcagtccag cagcccacac
3241 ctgcaggcag gatgctgtcg tcaatgagct gagggtagct gctttgctga agacctcaca
3301 cgatgtccaa tctcatccaa ataacattgt tcccatcctc cccacccacc acatcaaaac
3361 ataacacatc acagcactca gtagaggtcc tgcctcccca tttctcaagg gaagccagta
3421 ggcaacacag ccagcacggt gctctccagg gcagcccctc tcagacgagg aggcagcggg
3481 tgcagccagg tgtctgcaga gcagccacaa aggtggccta ggatgcgggt gtctccccag
3541 gtgagtccat ccacacacgt ttgaaaaaca ctattagtct ttctaacaca ctgagggaaa
3601 gattaaaatc tgtggaataa aggaggagat tttatttaca gattttttta aaagccacct
3661 gggttgacac cttcctactt atccactaga tgtcatcaga ggtgctgttc cgtggttctg
3721 cattaacccc tgcctcatgt ctgtaacatg tgacagtaat tccagctcgg tccctccagg
3781 caaaggagaa acgggactta cttcacagga cagaggattg acagaagtca gtttaagata
3841 agtgtttgaa tcagatttca gaacatctca ttcatttctt agatttgtgt tcacaattgt
3901 gttctctaaa atgtgtctaa attttaaaaa tatgtacatg cataatgtca ttttaaaatc
3961 tgaaggaaag aatttgaagt ccacaaaaag tgtttgaggt tctttggttt tgttagtaaa
4021 agccagttct gtggtgacga aaaaaaaaaa aaaa
//