LOCUS BC069231 2108 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens septin 6, mRNA (cDNA clone MGC:78418 IMAGE:4852319),
complete cds.
ACCESSION BC069231
VERSION BC069231.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2108)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2108)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 54 Row: d Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33624834.
FEATURES Location/Qualifiers
source 1..2108
/db_xref="H-InvDB:HIT000263385"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:78418 IMAGE:4852319"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2108
/gene="SEPT6"
/gene_synonym="KIAA0128"
/gene_synonym="MGC16619"
/gene_synonym="MGC20339"
/gene_synonym="RP5-876A24.2"
/gene_synonym="SEP2"
/db_xref="GeneID:23157"
/db_xref="HGNC:HGNC:15848"
CDS 38..1321
/gene="SEPT6"
/gene_synonym="KIAA0128"
/gene_synonym="MGC16619"
/gene_synonym="MGC20339"
/gene_synonym="RP5-876A24.2"
/gene_synonym="SEP2"
/codon_start=1
/product="septin 6"
/protein_id="AAH69231.1"
/db_xref="GeneID:23157"
/db_xref="HGNC:HGNC:15848"
/translation="MAATDIARQVGEGCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFN
ILCVGETGLGKSTLMDTLFNTKFEGEPATHTQPGVQLQSNTYDLQESNVRLKLTIVST
VGFGDQINKEDSYKPIVEFIDAQFEAYLQEELKIRRVLHTYHDSRIHVCLYFIAPTGH
SLKSLDLVTMKKLDSKVNIIPIIAKADAISKSELTKFKIKITSELVSNGVQIYQFPTD
DESVAEINGTMNAHLPFAVIGSTEELKIGNKMMRARQYPWGTVQVENEAHCDFVKLRE
MLIRVNMEDLREQTHTRHYELYRRCKLEEMGFKDTDPDSKPFSLQETHEAKRNEFLGE
LQKKEEEMRQMFVQRVKEKEAELKEAEKELHEKFDRLKKLHQDEKKKLEDKKKSLDDE
VNAFKQRKTAAELLQSQGSQAGGSQTLKRDKEKKN"
BASE COUNT 567 a 579 c 522 g 440 t
ORIGIN
1 ggcggcaccc gtggcagccc tggcggacgc aggagcgatg gcagcgaccg atatagctcg
61 ccaggtgggt gaaggttgcc gaactgtccc cctggctgga catgtggggt ttgacagctt
121 gcctgaccag ctggtgaata agtccgtcag ccagggcttc tgcttcaaca tcctgtgcgt
181 gggagagaca ggtttgggca agtccaccct catggacacc ctgttcaaca ccaaattcga
241 aggggagcca gccacccaca cacagccggg tgtccagctc cagtctaata cctatgacct
301 ccaagagagc aacgtgaggc taaagctcac gatcgttagc acagttggct ttggggacca
361 gatcaacaaa gaggacagct acaagcctat cgtggaattc atcgatgcac aattcgaggc
421 ctacctgcag gaagagctaa agatccgaag agtgctacac acctaccatg actcccgaat
481 ccatgtctgc ttgtatttca ttgcccccac gggtcattcc ctgaagtctc tggacctagt
541 gactatgaag aagctggaca gtaaggtgaa catcatcccc atcattgcca aagcagatgc
601 catttcgaag agtgagctaa caaagttcaa aatcaaaatc accagcgagc ttgtcagcaa
661 cggagtccag atctatcagt ttcctacaga tgatgagtcg gtggcagaga tcaatggaac
721 catgaacgcc cacctgccgt ttgctgtcat tggcagcaca gaagaactga agataggcaa
781 caagatgatg agggcgcggc agtatccttg gggcactgtg caggttgaaa acgaggccca
841 ctgcgacttt gtgaagctgc gggagatgct gattcgggtc aacatggagg atctgcggga
901 gcagacccac acccggcact atgagctgta tcgccgctgt aagctggagg agatgggctt
961 caaggacacc gaccctgaca gcaaaccctt cagtttacag gagacacatg aggccaaaag
1021 gaacgagttc ctaggggaac tccagaaaaa agaagaggag atgagacaga tgttcgtcca
1081 gcgagtcaaa gagaaagaag cggagctcaa agaggcagag aaagagctgc acgagaagtt
1141 tgaccgtctg aagaaactgc accaggacga gaagaagaaa ctggaggata agaagaaatc
1201 cctggatgat gaagtgaatg ctttcaagca aagaaagacg gcggctgagc tgctccagtc
1261 ccagggctcc caggctggag gctcacagac tctgaagaga gacaaagaga agaaaaatta
1321 actctgctgt ttgctgcatg ctgcatgaga cccagggtcc tgtttgggct tcctgtagac
1381 acccttttcc tgcgcaacag agctgggcct ccctttctct aatttccccc ttaacatgcc
1441 tggggggcat acaatccaac ccgcgccctc tcctctcttc ctgccaaggt ttatagaaac
1501 ctgagaatct gagggtgatg tctggccgct ggtcaagaag ccaacagtca tgtggctcgc
1561 agatgcatcc tgcatcccag tccccctccc agcaccccca gccatccccc ctgtcttccc
1621 ccacatcttt gccagaggtg tgacatggtc agggggccca tctgctactc tttcccacca
1681 gctcccctgt tccagttctg gttgctgtta gtttccctga ggtatttgca accaccatgg
1741 ctgggtaacc accgatcagc acagctgtcc ccttggtctc ctgtatccca gtcactagtc
1801 ctccctggtc caccccaccc tcatcctcag gagccacagc catttcttag agggtttcaa
1861 aaggacagcc tttggcgcct tttccttcta acctttgagt ccagcccttt ccagttttca
1921 ttcactcgaa gtaactgcac tcaagctgtg ctcaaaatcg gcaacgcatt tatttacacc
1981 aagcccttcc cataaaacac aactgctgaa gaaaatagca gacgtttccc ctctctctaa
2041 ctctgggtat cccacagatg caaaagggag aataaacctg aatattatta aaaaaaaaaa
2101 aaaaaaaa
//