LOCUS BC069211 1255 bp mRNA linear HUM 18-JAN-2005
DEFINITION Homo sapiens ATPase type 13A1, mRNA (cDNA clone IMAGE:4585878),
partial cds.
ACCESSION BC069211
VERSION BC069211.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1255)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1255)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (26-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 54 Row: c Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1255
/db_xref="H-InvDB:HIT000263371"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4585878"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1255
/gene="ATP13A1"
/gene_synonym="ATP13A"
/gene_synonym="CGI-152"
/gene_synonym="FLJ31858"
/gene_synonym="KIAA1825"
/db_xref="GeneID:57130"
CDS <1..977
/gene="ATP13A1"
/gene_synonym="ATP13A"
/gene_synonym="CGI-152"
/gene_synonym="FLJ31858"
/gene_synonym="KIAA1825"
/codon_start=3
/product="ATP13A1 protein"
/protein_id="AAH69211.1"
/db_xref="GeneID:57130"
/translation="ALGHAPERVVERRRRPRDSPTLSNSGIRATSRTAKQRSGLPPSE
EQPTSQRDRLSQVLRDLEDESTPIVKLGDASIAAPFTSKLSSIQCICHVIKQGRCTLV
TTLQMFKILALNALILAYSQSVLYLEGVKFSDFQATLQGLLLAGCFLFISRSKPLKTL
SRERPLPNIFNLYTILTVMLQFFVHFLSLVYLYREAQARSPEKQEQFVDLYKEFEPSL
VNSTVYIMAMAMQMATFAINYKGPPFMESLPENKPLVWSLAVSLLAIIGLLLGSSPDF
NSQFGLVDIPVEFKLVIAQVLLLDFCLALLADRVLQFFLGTPKLKVPS"
BASE COUNT 289 a 426 c 316 g 224 t
ORIGIN
1 gcgctcttgg ccatgcccct gagcgggttg tcgagcggcg acggcggccc cgggacagcc
61 caaccctgag caacagtggc atcagagcca cctccaggac agccaagcag cggtcggggc
121 tccctccctc cgaggagcag ccaacctccc agagggaccg cctgagccag gtgctgcgag
181 acctcgagga cgagagtacg cccattgtga aactggggga tgccagcatc gcagcaccct
241 tcacctccaa gctctcatcc atccagtgca tctgccacgt gatcaagcag ggccgctgca
301 cgctggtgac cacgctacag atgttcaaga tcctggcgct caatgccctc atcctggcct
361 acagccagag cgtcctctac ctggagggag tcaagttcag tgacttccag gccaccctac
421 aggggctgct gctggccggc tgcttcctct tcatctcccg ttccaagccc ctcaagaccc
481 tctcccgaga acggcccctg cccaacatct tcaacctgta caccatcctc accgtcatgc
541 tccagttctt tgtgcacttc ctgagccttg tctacctgta ccgtgaggcc caggcccgga
601 gccccgagaa gcaggagcag ttcgtggact tgtacaagga gtttgagcca agcctggtca
661 acagcaccgt ctacatcatg gccatggcca tgcagatggc caccttcgcc atcaattaca
721 aaggcccgcc cttcatggag agcctgcccg agaacaagcc cctggtgtgg agtctggcag
781 tttcactcct ggccatcatt ggcctgctcc tcggctcctc gcccgacttc aacagccagt
841 ttggcctcgt ggacatccct gtggagttca agctggtcat tgcccaggtc ctgctcctgg
901 acttctgcct ggcgctcctg gccgaccgcg tcctgcagtt cttcctgggg accccgaagc
961 tgaaagtgcc ttcctgagat ggcagtgctg gtacccactg cccaccctgg ctgccgctgg
1021 gcgggaaccc caacagggcc ccgggaggga accctgcccc caacccccca cagcaaggct
1081 gtacagtctc gcccttggaa gactgagctg ggacccccac agccatccgc tggcttggcc
1141 agcagaacca gccccaagcc agcacctttg gtaaataaag cagcatctga gattttaaaa
1201 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//