LOCUS BC069184 2061 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein L, mRNA (cDNA
clone IMAGE:6174088), partial cds.
ACCESSION BC069184
VERSION BC069184.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2061)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2061)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: a Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52632384.
FEATURES Location/Qualifiers
source 1..2061
/db_xref="H-InvDB:HIT000263345"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6174088"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2061
/gene="HNRNPL"
/gene_synonym="hnRNP-L"
/gene_synonym="P/OKcl.14"
/db_xref="GeneID:3191"
/db_xref="HGNC:HGNC:5045"
/db_xref="MIM:603083"
CDS <1..1720
/gene="HNRNPL"
/gene_synonym="hnRNP-L"
/gene_synonym="P/OKcl.14"
/codon_start=2
/product="HNRNPL protein"
/protein_id="AAH69184.2"
/db_xref="GeneID:3191"
/db_xref="HGNC:HGNC:5045"
/db_xref="MIM:603083"
/translation="QRQQPDEQRRRSGAMVKMAAAGGGGGGGRYYGGGSEGGRAPKRL
KTDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHKTPASPVVHIRGLIDGVVEADLV
EALQEFGPISYVVVMPKKRQALVEFEDVLGACNAVNYAADNQIYIAGHPAFVNYSTSQ
KISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKNGVQAM
VEFDSVQSAQRAKASLNGADIYSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNLSGQ
GDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPPHYEGRRMGPPVGG
HRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMVYGLDQSKMNCDRVFNVFCLYGNV
EKVKFMKSKPGAAMVEMADGYAVDRAITHLNNNFMFGQKLNVCVSKQPAIMPGQSYGL
EDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPLEVTEENFFEICDELG
VKRPSSVKVFSGKSERSSSGLLEWESKSDALETLGFLNHYQMKNPNGPYPYTLKLCFS
TAQHAS"
BASE COUNT 503 a 534 c 561 g 463 t
ORIGIN
1 gcagaggcag cagccggacg agcagcggag gcggtcggga gcgatggtga agatggcggc
61 ggcgggcggc ggaggcggcg gtggccgcta ctacggcggc ggcagtgagg gcggccgggc
121 ccctaagcgg ctcaagactg acaacgccgg cgaccagcac ggaggcggcg gcggtggcgg
181 tggaggagcc ggggcggcgg gcggcggcgg cggtggggag aactacgatg acccgcacaa
241 aacccctgcc tccccagttg tccacatcag gggcctgatt gacggtgtgg tggaagcaga
301 ccttgtggag gccttgcagg agtttggacc catcagctat gtggtggtaa tgcctaaaaa
361 gagacaagca ctggtggagt ttgaagatgt gttgggggct tgcaacgcag tgaactacgc
421 agccgacaac caaatataca ttgctggtca cccagctttt gtcaactact ctaccagcca
481 gaagatctcc cgccctgggg actcggatga ctcccggagc gtgaacagtg tgcttctctt
541 taccatcctg aaccccattt attcgatcac cacggatgtt ctttacacta tctgtaatcc
601 ttgtggccct gtccagagaa ttgtcatttt caggaagaat ggagttcagg cgatggtgga
661 atttgactca gttcaaagtg cccagcgggc caaggcctct ctcaatgggg ctgatatcta
721 ttctggctgt tgcactctga agatcgaata cgcaaagcct acacgcttga atgtgttcaa
781 gaatgatcag gatacttggg actacacaaa ccccaatctc agtggacaag gtgaccctgg
841 cagcaacccc aacaaacgcc agaggcagcc ccctctcctg ggagatcacc ccgcagaata
901 tggagggccc cacggtgggt accacagcca ttaccatgat gagggctacg ggcccccccc
961 acctcactac gaagggagaa ggatgggtcc accagtgggg ggtcaccgtc ggggcccaag
1021 tcgctacggc ccccagtatg ggcacccccc accccctccc ccaccacccg agtatggccc
1081 tcacgccgac agccctgtgc tcatggtcta tggcttggat caatctaaga tgaactgtga
1141 ccgagtcttc aatgtcttct gcttatatgg caatgtggag aaggtgaaat tcatgaaaag
1201 caagccgggg gccgccatgg tggagatggc tgatggctac gctgtagacc gggccattac
1261 ccacctcaac aacaacttca tgtttgggca gaagctgaat gtctgtgtct ccaagcagcc
1321 agccatcatg cctggtcagt catacgggtt ggaagacggg tcttgcagtt acaaagactt
1381 cagtgaatcc cggaacaatc ggttctccac cccagagcag gcagccaaga accgcatcca
1441 gcaccccagc aacgtgctgc acttcttcaa cgccccgctg gaggtgaccg aggagaactt
1501 ctttgagatc tgcgatgagc tgggagtgaa gcggccatct tctgtgaaag tattctcagg
1561 caaaagtgag cgcagctcct ctggactgct ggagtgggaa tccaagagcg atgccctgga
1621 gactctgggc ttcctgaacc attaccagat gaaaaaccca aatggtccat acccttacac
1681 tctgaagttg tgtttctcca ctgctcagca cgcctcctaa ttaggtgcct aggaagagtc
1741 ccatctgagc aggaagacat ttctctttcc tttatgccat tttttgtttt tgttatttgc
1801 aaaagatctt gtattccttt tttttttttt ttttaaatgc taggtttgta gaggcttact
1861 taaccttaat ggaaacgctg gaaatctgca gggggaggga gaggggaact gttatctccc
1921 aagattaacc ttcactttta aaaaattatt gtacatgtga tttttttttt tcctgttcat
1981 acatttgtgc tgcccatgta ctcttggcac atttcaataa aattgtttgg aaaataaaaa
2041 aaaaaaaaaa aaaaaaaaaa a
//