LOCUS BC069013 1748 bp mRNA linear HUM 27-APR-2004
DEFINITION Homo sapiens ankyrin repeat domain 11, mRNA (cDNA clone
IMAGE:5952586), partial cds.
ACCESSION BC069013
VERSION BC069013.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1748)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1748)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 54 Row: h Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7019448.
FEATURES Location/Qualifiers
source 1..1748
/db_xref="H-InvDB:HIT000263197"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5952586"
/tissue_type="Pancreas, ductal carcinoma"
/clone_lib="NIH_MGC_110"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1748
/gene="ANKRD11"
/gene_synonym="LZ16"
/gene_synonym="T13"
/db_xref="GeneID:29123"
CDS 377..>1748
/gene="ANKRD11"
/gene_synonym="LZ16"
/gene_synonym="T13"
/codon_start=1
/product="ANKRD11 protein"
/protein_id="AAH69013.1"
/db_xref="GeneID:29123"
/translation="MPKGGCPKAPQQEELPLSSDMVEKQTGKKDKDKVSLTKTPKLER
GDGGKEVRERASKRKLPFTAGANGEQKDSDTEKQGPERKRIKKEPVTRKAGLLFGMGL
SGIRAGYPLSERQQVALLMQMTAEESANSPVDTTPKHPSQSTVCQKGTPNSASKTKDK
VNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAK
QLLAAGAEVNTKGLDDDTPLHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVANS
PTMVNLLLGKGTYTSSEESSTESSEEEDAPSFAPSSSVDGNNTDSEFEKGLKHKAKNP
EPQKATAPVKDEYEFDEDDEQDRVPPVDDKHLLKKDYRKETKSNSFISIPKMEVKSYT
KNNTIAPKKASHRILSDTSDEEDASVTVGTGEKLRLSAHTILPGSKTREPSNAKQQKE
KKKKKKK"
misc_feature 860..1228
/gene="ANKRD11"
/gene_synonym="LZ16"
/gene_synonym="T13"
/note="ANK; Region: ankyrin repeats"
/db_xref="CDD:cd00204"
BASE COUNT 472 a 507 c 534 g 235 t
ORIGIN
1 catcagtagc gtccgcaccg ggagccgcgg ctctcgcccg agccgtgggc gcgcccgagg
61 ggcgggctcg cctcccgccg tccctcgcag ctctgccggg cccgagcccg cgccgccgcc
121 gccgccgcct tgccgctcgg gccgcgcggc ccgggaaacg cggccgcggg ctgcatgggc
181 agcgcccgcg ccccgccgct gagccgtcgc ggagccgcgc agccctcgga gcacgaatat
241 atacagccct gctctgggac acacctccat tggatttaaa agacagtcct cgtcagcact
301 gactttcagc tatggaatcg acggttgatg atgaagcgcc ggccgtgtaa atgaagatcg
361 ggtgaggagc aggacgatgc ccaagggtgg gtgccctaaa gcaccacagc aggaagagct
421 tcccctcagc agcgacatgg tggagaagca gactgggaaa aaggataaag ataaagtttc
481 tctaaccaag accccaaaac tggagcgtgg cgatggcggg aaggaggtga gggagcgagc
541 cagcaagcgg aagctgccct tcaccgcggg cgccaatggg gagcagaagg actcggacac
601 agagaagcag ggccctgagc ggaagaggat taagaaggag cctgtcaccc ggaaggccgg
661 gctgctgttt ggcatggggc tgtctggaat ccgagccggc taccccctct ccgagcgcca
721 gcaggtggcc cttctcatgc agatgacggc cgaggagtct gccaacagcc cagtggacac
781 aacaccaaag cacccctccc agtctacagt gtgtcagaag ggaacgccca actctgcctc
841 aaaaaccaaa gataaagtga acaagagaaa cgagcgtgga gagacccgcc tgcaccgagc
901 cgccatccgc ggggacgccc ggcgcatcaa agagctcatc agcgaggggg cagacgtcaa
961 cgtcaaggac ttcgcaggct ggacggcgct gcacgaggcc tgtaaccggg gctactacga
1021 cgtcgcgaag cagctgctgg ctgcaggtgc ggaggtgaac accaagggcc tagatgacga
1081 cacgcctttg cacgacgctg ccaacaacgg gcactacaag gtggtgaagc tgctgctgcg
1141 gtacggaggg aacccgcagc agagcaacag gaaaggcgag acgccgctga aagtggccaa
1201 ctcccccacg atggtgaacc tcctgttagg caaaggcact tacacttcca gcgaggagag
1261 ctcgacggag agctcagaag aggaagacgc accatccttc gcaccttcca gttcagtcga
1321 cggcaacaac acggactccg agttcgaaaa aggcctcaag cacaaggcca agaacccaga
1381 gccacagaag gccacggccc ccgtcaagga cgagtatgag tttgatgagg acgacgagca
1441 ggacagggtt cctccggtgg acgacaagca cctattgaaa aaggactaca gaaaagaaac
1501 gaaatccaat agttttatct ctatacccaa aatggaggtt aaaagttaca ctaaaaataa
1561 cacgattgca ccaaagaaag cgtcccatcg tatcctgtca gacacgtcgg acgaggagga
1621 cgcgagtgtc accgtgggga caggagagaa gctgagactc tcggcacata cgatattgcc
1681 tggtagtaag acacgagagc cttctaatgc caagcagcag aaggaaaaaa aaaaaaaaaa
1741 aaaaaaaa
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