LOCUS BC069012 1563 bp mRNA linear HUM 21-AUG-2007
DEFINITION Homo sapiens sorting nexin 24, mRNA (cDNA clone MGC:78539
IMAGE:4585781), complete cds.
ACCESSION BC069012
VERSION BC069012.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1563)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1563)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 54 Row: c Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7662654.
FEATURES Location/Qualifiers
source 1..1563
/db_xref="H-InvDB:HIT000263196"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:78539 IMAGE:4585781"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1563
/gene="SNX24"
/gene_synonym="PRO1284"
/gene_synonym="SBBI31"
/db_xref="GeneID:28966"
/db_xref="HGNC:HGNC:21533"
CDS 117..596
/gene="SNX24"
/gene_synonym="PRO1284"
/gene_synonym="SBBI31"
/codon_start=1
/product="SNX24 protein"
/protein_id="AAH69012.1"
/db_xref="GeneID:28966"
/db_xref="HGNC:HGNC:21533"
/translation="MEVYIPSFRYEESDLERGYTVFKIEVLMNGRKHFVEKRYSEFHA
LHKKLKKCIKTPEIPSKHVRNWVPKVLEQRRQGLETYLQAVILENEELPKLFLDFLNV
RHLPSLPKAESCGSFDETESEESSKLSHQPVLLFLRDPYVLPAASGNQTCHLLTALY"
BASE COUNT 491 a 331 c 356 g 385 t
ORIGIN
1 cggggccccg cgagcgcagc ggggcgggag gcggggcggc ccggccgtgg gcggagcggc
61 ggccgcggcc gtgagcctgc ccccaactcg ccctcagccg gctggccggc gcggccatgg
121 aggtctacat cccgtccttt cgctatgaag agagcgacct ggagcgggga tacacggtgt
181 ttaagataga agtgctaatg aatggaagaa aacattttgt tgaaaagaga tacagcgaat
241 ttcatgcttt gcacaaaaag cttaagaaat gtataaaaac tccagaaatc ccttctaaac
301 atgttaggaa ctgggtcccc aaagtcttgg aacagcgacg acaaggcttg gaaacatact
361 tacaggctgt cattttagaa aatgaagaac ttcccaaact gtttcttgat ttcctaaatg
421 tgcgacactt gccctctcta ccaaaggcag aaagttgtgg atcttttgat gaaacagagt
481 ctgaagagtc aagcaaactg tcccaccagc ctgtgctgct gttcctcagg gatccatatg
541 tcttgcctgc agccagcggt aatcaaacct gtcatctgct aacagctctt tactgatctg
601 accctgcacc acataaacca cgtttttaat acagattttc caaatgtggt tattgaagga
661 gtcctccatg ggatatttta ccctcatcta cagcccaggt agaaatccta catggctaaa
721 agaagcagaa gcaagtttcg aagtcacagt caaggaaatc aatacctacc aatttaacct
781 aaacgctatg atatataaca gctctagcta gtggtaaagt gcacagtccc agcttaattc
841 agggcaggga catttccatt agaatggtgc tcttaaaaat agaaactgaa ccggggcggt
901 ggtcaggcta aggccaagtg tttaagaagt agagtgtagc tgccagcgta gaaacccatg
961 aaaaggaggc cacaggagat tcctgggagc actgggtgta gcaaaacaaa gccactctct
1021 gcttcagtcg caccatttgc taattgaaaa tcatatcctg aatcatactg agactgatca
1081 actttggtag cttttttgtt cagatcttat gacacactac tcttctcacc gtgagatttt
1141 ctcagccagt gatagtacat tttgaaatgc tggcaccagg agacggccac agacacacac
1201 tgctaaatgt gaagatggaa ctaaactgga aattaaatta tactgacaat attatggcat
1261 ttttaagatc atggcatttt aatttacatt agagtggagt tgcatcatac tcaggggtta
1321 gcttccaagg tcagtacata ggtaaaatgg gctattagga tgatccttga aagcccttta
1381 gaagggtgcc atgttggaaa cctgtacatc cacaacaagt agcttttcct cctatgttgg
1441 aaaaaaagac tgtttctttg tttgaagacc aagtgaagtt gttggtgttt gtttaggggc
1501 cattttgtta aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1561 aaa
//