LOCUS BC068998 928 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens COMM domain containing 4, mRNA (cDNA clone MGC:78431
IMAGE:6586373), complete cds.
ACCESSION BC068998
VERSION BC068998.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 928)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 928)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 54 Row: p Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361660.
FEATURES Location/Qualifiers
source 1..928
/db_xref="H-InvDB:HIT000263182"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:78431 IMAGE:6586373"
/tissue_type="Breast, adenocarcinoma"
/clone_lib="NIH_MGC_107"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..928
/gene="COMMD4"
/gene_synonym="FLJ20452"
/db_xref="GeneID:54939"
/db_xref="HGNC:HGNC:26027"
CDS 17..616
/gene="COMMD4"
/gene_synonym="FLJ20452"
/codon_start=1
/product="COMM domain containing 4"
/protein_id="AAH68998.1"
/db_xref="GeneID:54939"
/db_xref="HGNC:HGNC:26027"
/translation="MRFRFCGDLDCPDWVLAEISTLAKMSSVKLRLLCSQVLKELLGQ
GIDYEKILKLTADAKFESGDVKATVAVLSFILSSAAKHSVDGESLSSELQQLGLPKEH
AASLCRCYEEKQSPLQKHLRVCSLRMNRLAGVGWRVDYTLSSSLLQSVEEPMVHLRLE
VAAAPGTPAQPVAMSLSADKFQVLLAELKQAQTLMSSLG"
BASE COUNT 221 a 250 c 269 g 188 t
ORIGIN
1 ctggcttctt ggcgcgatga ggttccggtt ctgtggtgat ctggactgtc ccgactgggt
61 cctggcagaa atcagcacgc tggccaagat gtcctctgtg aagttgcggc tgctctgcag
121 ccaggtacta aaggagctgc tgggacaggg gattgattat gagaagatcc tgaagctcac
181 ggctgacgcc aagtttgagt caggcgatgt gaaggccaca gtggcagtgc tgagtttcat
241 cctctccagt gcggccaagc acagtgtcga tggcgaatcc ttgtccagtg aactgcagca
301 gctggggctg cccaaagagc acgcggccag cctgtgccgc tgttatgagg agaagcaaag
361 ccccttgcag aagcacttgc gggtctgcag cctacgcatg aataggttgg caggtgtggg
421 ctggcgggtg gactacaccc tgagctccag cctgctgcaa tccgtggaag agcccatggt
481 gcacctgcgg ctggaggtgg cagctgcccc agggacccca gcccagcctg ttgccatgtc
541 cctctcagca gacaagttcc aggtcctcct ggcagaactg aagcaggccc agaccctgat
601 gagctccctg ggctgaggag aagggtgttc caggcctgtg tggagccgcc ctgcccgtat
661 ggagtcacgc cctctgaact gctcttcggg aggcagccct ggttctagga tgctgaggcc
721 ctggcccgga ctctggcctc ccagatcccc agctgcctca cttctctctt gagaacttgg
781 ctcagggctc ctgaggacct ttcccagcat taccttccct tcccttgaaa ggcaattgtt
841 ggctgttttc ataagcagga aaaataaaca gaagtataaa ggaaaaaaaa aaaaaaaaaa
901 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//