LOCUS BC068551 3037 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens v-yes-1 Yamaguchi sarcoma viral related oncogene
homolog, mRNA (cDNA clone IMAGE:30334379), partial cds.
ACCESSION BC068551
VERSION BC068551.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3037)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3037)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: j Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4505054.
FEATURES Location/Qualifiers
source 1..3037
/db_xref="H-InvDB:HIT000263108"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30334379"
/tissue_type="Placenta, pre-eclamptic"
/clone_lib="NIH_MGC_148"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..3037
/gene="LYN"
/gene_synonym="JTK8"
/db_xref="GeneID:4067"
/db_xref="MIM:165120"
CDS <1..1750
/gene="LYN"
/gene_synonym="JTK8"
/codon_start=2
/product="LYN protein"
/protein_id="AAH68551.1"
/db_xref="GeneID:4067"
/db_xref="MIM:165120"
/translation="VPLPPRRAALPLAPRPWRLRARRAAASSPRQAGRPRHPRPRASS
PSPRVQRSRPAASPYAGPAGPPRRAPHSELKSPWSSAAPKLSPRAGNMGCIKSKGKDS
LSDDGVDLKTQPVPESQLLPGQRFQTKDPEEQGDIVVALYPYDGIHPDDLSFKKGEKM
KVLEEHGEWWKAKSLLTKKEGFIPSNYVAKLNTLETEEWFFKDITRKDAERQLLAPGN
SAGAFLIRESETLKGSFSLSVRDFDPVHGDVIKHYKIRSLDNGGYYISPRITFPCISD
MIKHYQKQADGLCRRLEKACISPKPQKPWDKDAWEIPRESIKLVKRLGAGQFGEVWMG
YYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYM
AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLM
CKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVT
YGKIPYPGRTNADVMTALSQGYRMPRVENCPDELYDIMKMCWKEKAEERPTFDYLQSV
LDDFYTATEGQYQQQP"
BASE COUNT 864 a 710 c 703 g 760 t
ORIGIN
1 agttcctctc ccgccgcgcc gggccgcgct gccgctcgct ccccggccgt ggcgcctccg
61 ggccagacgc gctgcagcct ccagcccgcg gcaagcgggg cggccgcgcc acccccggcc
121 ccgcgccagc agcccctcgc cgcgcgtcca gcgttcccgg ccagcagcct ccccatacgc
181 aggtcctgct gggccgcccc gtcgcgcccc ccactctgaa ctcaagtcac cgtggagctc
241 cgccgccccg aaactttcac cgcgagcggg aaatatggga tgtataaaat caaaagggaa
301 agacagcttg agtgacgatg gagtagattt gaagactcaa ccagttccag aatctcagct
361 tttacctgga cagaggtttc aaactaaaga tccagaggaa caaggagaca ttgtggtagc
421 cttgtacccc tatgatggca tccacccgga cgacttgtct ttcaagaaag gagagaagat
481 gaaagtcctg gaggagcatg gagaatggtg gaaagcaaag tcccttttaa caaaaaaaga
541 aggcttcatc cccagcaact atgtggccaa actcaacacc ttagaaacag aagagtggtt
601 tttcaaggat ataaccagga aggacgcaga aaggcagctt ttggcaccag gaaatagcgc
661 tggagctttc cttattagag aaagtgaaac attaaaagga agcttctctc tgtctgtcag
721 agactttgac cctgtgcatg gtgatgttat taagcactac aaaattagaa gtctggataa
781 tgggggctat tacatctctc cacgaatcac ttttccctgt atcagcgaca tgattaaaca
841 ttaccaaaag caggcagatg gcttgtgcag aagattggag aaggcttgta ttagtcccaa
901 gccacagaag ccatgggata aagatgcctg ggagatcccc cgggagtcca tcaagttggt
961 gaaaaggctt ggcgctgggc agtttgggga agtctggatg ggttactata acaacagtac
1021 caaggtggct gtgaaaaccc tgaagccagg aactatgtct gtgcaagcct tcctggaaga
1081 agccaacctc atgaagaccc tgcagcatga caagctcgtg aggctctacg ctgtggtcac
1141 cagggaggag cccatttaca tcatcaccga gtacatggcc aagggcagtt tgctggattt
1201 cctgaagagc gatgaaggtg gcaaagtgct gcttccaaag ctcattgact tttctgctca
1261 gattgcagag ggaatggcat acatcgagcg gaagaactac attcaccggg acctgcgagc
1321 agctaatgtt ctggtctccg agtcactcat gtgcaaaatt gcagattttg gccttgctag
1381 agtaattgaa gataatgagt acacagcaag ggaaggtgct aagttcccta ttaagtggac
1441 ggctccagaa gcaatcaact ttggatgttt cactattaag tctgatgtgt ggtcctttgg
1501 aatcctccta tacgaaattg tcacctatgg gaaaattccc tacccaggga gaactaatgc
1561 cgacgtgatg accgccctgt cccagggcta caggatgccc cgtgtggaga actgcccaga
1621 tgagctctat gacattatga aaatgtgctg gaaagaaaag gcagaagaga gaccaacgtt
1681 tgactactta cagagcgtcc tggatgattt ctacacagcc acggaagggc aataccagca
1741 gcagccttag agcacaggga gacccgtcca tttggcaggg gtggctgcct catttagaga
1801 ggaaaagtaa ccatcactgg ttgcacttat gatttcatgt gcggggatca tctgccgtgc
1861 ctggatcctg aaatagaggc taaattactc aggaagaaca ccctctaaat gggaaagtat
1921 tctgtactct tagatggatt ctccactcag ttgcaacttg gacttgtcct cagcagctgg
1981 taatcttgct ctgcttgaca acatctgagt gcagccgttt gagaagaaaa catctattct
2041 ctccaaaaat gcacccaact agctctatgt ttacaaatgg acataggact caaagtttca
2101 gagaccattg caatgaatcc ccaataattg cagaactaaa ctcatttata aagctaaaat
2161 aaccggatat atacatagca tgacatttct ttgtgctttg gcttacttgt ttaaaaaaaa
2221 aaaaaaacta atccaacctg ttagattttg caggtgaagt cagcagctta aaaatgtctt
2281 tcccagattt caatgatttt tttcccccta cctcccaaaa tctgagactg ttaaaacatt
2341 tttcttctat gaacactgct cagacctgct agacatgcca taggagtggc gtgcacatct
2401 ctctctcttc cagcaggagg agcccgtgag cacgcacagc tgccctgtct gctcacccga
2461 aggcaccggg ctcacctgga cctcccagga aagggagaag agcctcagaa actgctctgt
2521 gtttagaagg aatattttta agagtccagc tttttcattt ccacaatttc ctatatccag
2581 atttgttttg acaatgtagt ttggaagaac taagattcta atctctgaag aaccttatag
2641 ggccttctaa aacataagag tttcctttgt tgcttcaaat atttgaacat tatgttaaag
2701 atcaagtatt aattttagtt gtactctaga aagctaaagt gccacattcg gggctatttt
2761 tatgattcag caatcttttc taaattgtgt agcatgtgta tgagactatt tatacccaag
2821 gatatgaagg aacataagtg actacaaggc tctaataagc cacggtggca ggaggttcaa
2881 gcggttctgt tcactaaatt tttctcctgt aagctttgaa tggaaacttc tgtatcacat
2941 gatgtgtttc acttatgctg ttgtgtatat acctaatatt tctatttttg attttatttt
3001 aatacacctc gtccaataac gaaaaaaaaa aaaaaaa
//