LOCUS BC068540 3065 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens component of oligomeric golgi complex 5, mRNA (cDNA
clone MGC:87389 IMAGE:4374289), complete cds.
ACCESSION BC068540
VERSION BC068540.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3065)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3065)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: a Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32481217.
FEATURES Location/Qualifiers
source 1..3065
/db_xref="H-InvDB:HIT000263097"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87389 IMAGE:4374289"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3065
/gene="COG5"
/gene_synonym="GTC90"
/db_xref="GeneID:10466"
/db_xref="MIM:606821"
CDS 273..2744
/gene="COG5"
/gene_synonym="GTC90"
/codon_start=1
/product="COG5 protein"
/protein_id="AAH68540.1"
/db_xref="GeneID:10466"
/db_xref="MIM:606821"
/translation="MGWVGGRRRDSASPPGRSRSAADDINPAPANMEGGGGSVAVAGL
GARGSGAAAATVRELLQDGCYSDFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQL
DRELHLQVVARHEDLLAQATGIESLEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIV
ARTAQLARLQVACDLLRRIIRILNLSKRLQGQLQGGSREITKAAQSLNELDYLSQGID
LSGIEVIENDLLFIARARLEVENQAKRLLEQGLETQNPTQVGTALQVFYNLGTLKDTI
TSVVDGYCATLEENINSALDIKVLTQPSQSAVRGGPGRSTMPTPGNTAALRASLWTNM
EKLMDHIYAVCGQVQHLQKVLAKKRDPVSHICFIEEIVKDGQPEIFYTFWNSVTQALS
SQFHMATNSSMFLKQAFEGEYPKLLRLYNDLWKRLQQYSQHIQGNFNASGTTDLYVDL
QHMEDDAQDIFIPKKPDYDPEKALKDSLQPYEAAYLSKSLSRLFDPINLVFPPGGRNP
PSSDELDGIIKTIASELNVAAVDTNLTLAVSKNVAKTIQLYSVKSEQLLSTQGDASQV
IGPLTEGQRRNVAVVNSLYKLHQSVTKVVSSQSSFPLAAEQTIISALKAIHALMENAV
QPLLTSVGDAIEAIIITMHQEDFSGSLSSSGKPDVPCSLYMKELQGFIARVMSDYFKH
FECLDFVFDNTEAIAQRAVELFIRHASLIRPLGEGGKMRLAADFAQMELAVGPFCRRV
SDLGKSYRMLRSFRPLLFQASEHVASSPALGDVIPFSIIIQFLFTRAPAELKSPFQRA
EWSHTRFSQWLDDHPSEKDRLLLIR"
BASE COUNT 836 a 688 c 742 g 799 t
ORIGIN
1 ggtttaatac ttgcttcaca gataagcgct gcggccacgt tccggtgccc accttctcct
61 tggctagggc acgacgccag cccagggggc gcggccctga gctgctgcga gagacagctg
121 aaagcgccgg cccgacggcc ttggctccct cggtgcgctg ggcgcagagc actcggaccc
181 tgggcgccca ctgctcgagt acctgcgcgg ctcctagcca ggcttagccc aggcgcgggc
241 tgagagtcag ttcgccaggt gggcctggag ccatgggctg ggtgggcggg cggcgccggg
301 attctgcgtc accacctggg cggagccgtt ctgctgctga cgacatcaac ccggcacctg
361 ccaacatgga aggtggcggc ggcagcgtcg ctgtagctgg cctcggagct cgaggctctg
421 gagcggctgc agctacagtc cgggaacttc tgcaggacgg gtgttatagt gactttttaa
481 acgaagactt tgatgtaaag acttatactt ctcaatctat tcatcaagct gtaattgctg
541 aacaactagc aaaacttgcc caaggaatca gtcagttgga cagagaacta cacttacagg
601 ttgttgcaag acatgaagat ttactggcac aagcaactgg gattgagtcg ttggaaggtg
661 ttcttcagat gatgcagacg agaattgggg ctttacaggg agctgttgat aggataaaag
721 caaaaattgt tgaaccatac aataagatag ttgcccggac tgcacaacta gcaagacttc
781 aggttgcctg tgatttgctt cggaggatta ttcgtatctt gaatctcagt aagagactcc
841 aaggacaact gcaaggggga agtagagaga taacaaaagc tgctcagagt ctcaatgaac
901 ttgattatct ttctcaagga atagatcttt ctggaataga agtgatagaa aatgatctac
961 tttttattgc aagagcccga cttgaagtgg aaaatcaagc taagcgccta ctagagcagg
1021 gtttggagac tcagaatcca actcaagtcg gaacagctct tcaggttttc tataatcttg
1081 gaactttgaa ggatactatt accagtgttg tggatggata ttgtgctact ttagaagaaa
1141 atatcaacag tgcattagac ataaaagttt tgactcagcc ttcccagtca gctgtgagag
1201 ggggacctgg acgatctacc atgccaaccc caggaaatac tgcagctttg cgtgcctcac
1261 tctggaccaa tatggagaaa cttatggatc atatttatgc tgtttgtgga caggtacaac
1321 atctacaaaa agtattggcc aagaagagag atcctgtttc tcacatttgt ttcattgaag
1381 aaatagttaa ggatggacaa ccggaaattt tctacacatt ttggaattca gttactcagg
1441 cactttcttc tcaatttcat atggcaacaa actcttcgat gtttttgaag caggcatttg
1501 aaggagaata ccctaaatta ttacgtcttt ataatgactt atggaagcgt cttcaacaat
1561 acagtcagca tatccaaggg aattttaatg caagtggaac tacagacctc tatgttgacc
1621 tacaacacat ggaagatgat gcacaagata tattcatacc aaaaaagcca gattatgatc
1681 cagaaaaggc tttgaaagac tcactacaac cctatgaggc tgcttatcta tcaaaatcct
1741 tatctcgact cttcgatcct atcaacttgg tttttccccc gggtggtcgt aatcctcctt
1801 cctctgatga acttgatggt attattaaaa ctatagcaag tgaactaaat gttgctgctg
1861 ttgatacaaa cctcacatta gctgtgtcaa aaaatgtggc aaagaccatc cagttataca
1921 gtgtaaaatc agagcagctt ctctccacac aaggagatgc aagtcaggtg attgggcctc
1981 ttactgaagg acagagaaga aatgtggcag tagtgaattc attgtataag ttgcaccaat
2041 cagtaacaaa ggtggtttcc agtcagagct cattcccact ggcagctgag caaactataa
2101 tttcagctct aaaggctatt catgctctta tggaaaatgc tgtgcaaccc ttactcactt
2161 ctgtgggaga tgctatagag gccataatca tcaccatgca tcaagaagac ttttctgggt
2221 cattatccag ctcaggaaaa cctgatgttc cttgttctct gtacatgaag gagctacaag
2281 gtttcattgc cagagttatg agtgactatt ttaaacactt tgaatgcttg gattttgtct
2341 ttgacaacac tgaggctatt gcccaaagag ctgttgaact ttttatccgc catgccagtc
2401 tcataagacc tcttggtgaa ggtgggaaaa tgcgacttgc tgctgatttt gcacagatgg
2461 agttggctgt gggtccattc tgtagacgag tatctgattt aggaaagtcc tatcggatgc
2521 tgagatcatt cagacctctg ctcttccagg caagtgaaca tgtagccagt agtcctgcat
2581 tgggggatgt gattccgttc agcatcatta ttcagttttt gttcacgaga gcacccgctg
2641 aactgaaatc tcctttccag agggcagagt ggtcccacac acgcttctct cagtggctgg
2701 atgaccatcc atctgaaaag gacaggctcc tcctcatcag gtaaagccag gtgctctggg
2761 ggcacccatc tggtctggaa gcccaaggag ggtggggatg caagagagga tgaaggagca
2821 gtgcctgggg gcatggacat gtgactgcac cttccagtgg cgggccacct cactgcctag
2881 gcacgggtgc tggagcaacc agcagttgga aatgttggcc acaacatctt ttgctttctt
2941 tcattccaaa ccttcctatc cctgatgtgc aatcctgtgt cccatgcaac cctaaggacc
3001 atgcatttgt acctttgaaa atcatcattt gctatgaaaa gttttgccca aaaaaaaaaa
3061 aaaaa
//