LOCUS BC068536 1786 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens KH domain containing, RNA binding, signal transduction
associated 3, mRNA (cDNA clone MGC:87377 IMAGE:5299218), complete
cds.
ACCESSION BC068536
VERSION BC068536.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1786)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1786)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: f Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5730072.
FEATURES Location/Qualifiers
source 1..1786
/db_xref="H-InvDB:HIT000263093"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87377 IMAGE:5299218"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1786
/gene="KHDRBS3"
/gene_synonym="Etle"
/gene_synonym="etoile"
/gene_synonym="SALP"
/gene_synonym="SLM-2"
/gene_synonym="SLM2"
/gene_synonym="T-STAR"
/db_xref="GeneID:10656"
CDS 207..1244
/gene="KHDRBS3"
/gene_synonym="Etle"
/gene_synonym="etoile"
/gene_synonym="SALP"
/gene_synonym="SLM-2"
/gene_synonym="SLM2"
/gene_synonym="T-STAR"
/codon_start=1
/product="KHDRBS3 protein"
/protein_id="AAH68536.1"
/db_xref="GeneID:10656"
/translation="MEEKYLPELMAEKDSLDPSFTHALRLVNQEIEKFQKGEGKEEKY
IDVVINKNMKLGQKVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSM
RDKAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIPDYND
EIRQAQLQELTYLNGGSENADVPVVRGKPTLRTRGVPAPAITRGRGGVTARPVGVVVP
RGTPTPRGVLSTRGPVSRGRGLLTPRARGVPPTGYRPPPPPPTQETYGEYDYDDGYGT
AYDEQSYDSYDNSYSTPAQSGADYYDYGHGLSEETYDSYGQEEWTNSRHKAPSARTAK
GVYRDQPYGRY"
BASE COUNT 544 a 390 c 435 g 417 t
ORIGIN
1 ggtgcgcggg gcggcgcgcg gcgtgcaggt cgcagctgtg gctcgggtgc tggcaggtgc
61 tggcgggact ggcggggatc gccgtggact gcctcagggg cgccgcagcc cgctcggccc
121 gagggcccgc ctaaccgcgc cgcccgcgcc cgctcctcct ccccgtgcgc ctggagtcca
181 catcccgggc ccggcggccg gcgagcatgg aggagaagta cctgccggag ctgatggcgg
241 agaaggactc cctggacccc tccttcacgc acgccctgcg cctggtgaac caagaaatag
301 aaaagtttca aaaaggagaa ggcaaggaag aaaagtacat cgatgtggtg attaataaga
361 acatgaagct gggacagaaa gtgttaattc ccgtaaaaca gttccctaag ttcaactttg
421 tggggaaact tttgggtcca cgtggcaatt ctctgaagcg tttacaagaa gaaaccttga
481 caaaaatgtc catccttggg aaaggttcca tgagagacaa ggccaaggaa gaagagttga
541 ggaaaagtgg agaagcgaag tacttccatc tcaatgatga tctccatgtt ctcattgaag
601 tgtttgcccc acctgcagaa gcttatgcca ggatgggaca tgctttggaa gaaatcaaaa
661 agttcctcat ccctgattat aatgatgaga tcaggcaagc acagctccag gagttaacat
721 atttgaatgg tggttcagaa aatgcagatg ttccagtggt tcgagggaaa cccaccttgc
781 gtacaagagg tgtaccagcc ccagcaataa ccaggggaag gggaggagtt acagcccggc
841 cagttggagt tgtagtacca cgagggacgc caactcccag aggagtcctg tccacccgag
901 ggccagtgag tcggggaaga ggacttctca ctcccagagc aagaggagtc cccccaactg
961 ggtacagacc tccaccgcca cccccgacac aagagactta tggagaatat gactatgatg
1021 atggatatgg cactgcttat gatgaacaga gttatgattc ctatgataac agctatagca
1081 ccccagccca aagtggtgct gattactatg attacggaca tggactcagt gaggagactt
1141 atgattccta cgggcaagaa gagtggacta actcaagaca caaggcacct tcagcgagga
1201 cagcaaaggg cgtctacaga gaccagccat atggcagata ctgattgtac tgtctgatgt
1261 tgtgaaatag ccaatctcca ccagtcctgt atactgttca aagtaatttt tttctatgaa
1321 caatcccttt ttaaataaat caaaatgctt aaaatctgaa tggatggaac ttaaaactac
1381 tttgttgaaa catcaacctg ggcagaaaaa aaaaaaaaaa aaagacatgt aaaattttgt
1441 tatttccagt ctgtatatga aaaaataggt catcaaaagg aaaaaaaata actttgatta
1501 actagtgtta aacaaaaaat aggtttacta aatatgttaa tctattcttt taacataagc
1561 ctcacctttc attttaaagg tttccataga atttagttat tttatctttc agccatatgc
1621 tagttttttt ttctcttgcc aacatgcgta aaaagggaag ccaattacaa gtgcaaataa
1681 tgtggtattc ttttgtaact caagtcttga aatgttctgt agtgttaagc aaagtctcct
1741 cttgcttgat actaaataaa cttttgaaag aaaaaaaaaa aaaaaa
//