LOCUS BC068518 3051 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens potassium channel tetramerisation domain containing 9,
mRNA (cDNA clone MGC:87312 IMAGE:5265435), complete cds.
ACCESSION BC068518
VERSION BC068518.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3051)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3051)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: l Column: 15.
FEATURES Location/Qualifiers
source 1..3051
/db_xref="H-InvDB:HIT000263075"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87312 IMAGE:5265435"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3051
/gene="KCTD9"
/gene_synonym="FLJ20038"
/db_xref="GeneID:54793"
/db_xref="HGNC:HGNC:22401"
CDS 36..1205
/gene="KCTD9"
/gene_synonym="FLJ20038"
/codon_start=1
/product="potassium channel tetramerisation domain
containing 9"
/protein_id="AAH68518.1"
/db_xref="GeneID:54793"
/db_xref="HGNC:HGNC:22401"
/translation="MRRVTLFLNGSRKNGKVVAVYGTLSDLLSVASSKLGIKATSVYN
GKGGLIDDIALIRDDDVLFVCEGEPFIDPQTDSKPPEGLLGFHTDWLTLNVGGRYFTT
TRSTLVNKEPDSMLAHMFKDKGVWGNKQDHRGAFLIDRSPEYFEPILNYLRHGQLIVN
DGINLLGVLEEARFFGIDSLIEHLEVAIKNSQPPEDHSPISRKEFVRFLLATPTKSEL
RCQGLNFSGADLSRLDLRYINFKMANLSRCNLAHANLCCANLERADLSGSVLDCANLQ
GVKMLCSNAEGASLKLCNFEDPSGLKANLEGANLKGVDMEGSQMTGINLRVATLKNAK
LKNCNLRGATLAGTDLENCDLSGCDLQEANLRGSNVKGAIFEEMLTPLHMSQSVR"
BASE COUNT 971 a 524 c 628 g 928 t
ORIGIN
1 tggcggctca ctcaggaccc agcgggggca gcgcgatgag gcgggtgacc ctgttcctga
61 acggcagccg caaaaacgga aaggtggttg ctgtatatgg aactttatct gatttgcttt
121 ctgtggccag cagtaaactc ggcataaaag ccaccagtgt gtataatggg aaaggtggac
181 tgattgatga tattgctttg atcagggatg atgatgtttt gtttgtttgt gaaggagagc
241 catttattga tcctcagaca gattctaagc ctcctgaggg attgttagga ttccacacag
301 actggctgac attaaatgtt ggagggcggt actttacaac tacacggagc actttagtga
361 ataaagaacc tgacagtatg ctggcccaca tgtttaagga caaaggtgtc tggggaaata
421 agcaagatca tagaggagct ttcttaattg accgaagtcc tgagtacttc gaacccattt
481 tgaactactt gcgtcatgga cagctcattg taaatgatgg cattaattta ttgggtgtgt
541 tagaagaagc aagatttttt ggtattgact cattgattga acacctagaa gtggcaataa
601 agaattctca accaccggag gatcattcac caatatcccg aaaggaattt gtccgatttt
661 tgctagcaac tccaaccaag tcagaactgc gatgccaggg tttgaacttc agtggtgctg
721 atctttctcg tttggacctt cgatacatta acttcaaaat ggccaattta agccgctgta
781 atcttgcaca tgcaaatctt tgctgtgcaa atcttgaacg agctgatctc tctggatcag
841 tgcttgactg tgcgaatctc cagggagtca agatgctctg ttctaatgca gaaggagcat
901 ccctgaaact gtgtaatttt gaggatcctt ctggtcttaa agccaattta gaaggtgcta
961 atctgaaagg tgtggatatg gaaggaagtc agatgacagg aattaacctg agagtggcta
1021 ccttaaaaaa tgcaaagttg aagaactgta acctcagagg agcaactctg gcaggaactg
1081 atttagagaa ttgtgatctg tctgggtgtg atcttcaaga agccaacctg agagggtcca
1141 acgtgaaggg agctatattt gaagagatgc tgacaccact acacatgtca caaagtgtca
1201 gatgagaatt ttaggggctg gaggaagatg taaaagatga aaatgttttc cttatcactt
1261 ttctttctcc acccactcag ttgtctagaa gaaataacac tgtaaggaaa tttaaaaaaa
1321 aaaacattta gaggattatg cttgttttga gtggtgcata agggaaaaaa ctgacttttt
1381 ttccatattc tgatttttaa cagaaaagca ctcatttaat agatgtaggg aaactagata
1441 ttgctgcctt ttgaatgggg taggggggtt tacctggttt tatgaccagg catagtatct
1501 attatatttg cttttaaata ggcatgatgt ggaaatacca tcttggtttg agatgcattt
1561 gaggatttta atttatggaa agcacaacat atgcaattat atttattgaa ttcctagatg
1621 cagtatggat atttaaattg ttaaaacttt atgaaaactt ggaaaaggtt gttcaggttt
1681 ataaatagct ttagtgatgc ctcccctctt taaatacctg tcacaccgta tgaatatggt
1741 gagatcagac tccctaagac tcttttcagg ttcattttta taatgtttac tttttaggac
1801 agaacagtag ctaaattaaa gtaatatcca gttcttactg attgagacag agtggaaaga
1861 aagacatcat tgtacatcac tgtcattcca aaggtacagt gtaactctgg atggaggaat
1921 aacttaccta tcactacaac acttacaaat gagaatttct cagaatttca ttctaggcaa
1981 gttccactca acaccagatc aagcaattct atctatttac actattagcc tagttttctc
2041 atacagtcat cacaagcata ggaagatact tcaaaaccaa aaaaaccaag gtgcatcatt
2101 aatattcatt taattcaaat accaaatagt ttacataggg ccagcttaga aatagatact
2161 aaatccagag ctactgcaat caaagcttat atgagtgaat atggtagagt tgcctgctaa
2221 aaggcaatgt aatataattg cagctagaac cctacagtgg ggaatgagga attttaaaca
2281 cacatttgat tacagccacc aaaaaaatag acgtaaaaat aaaggcattt ggctggtcca
2341 agatgtaatt atcaatcagt cagcacctgt gattctttta cttatttttt tgtggttttt
2401 ttttttaaac aaattttagc ccaattttct tgagtcattc tctctctgca gcagcagagg
2461 aagggcctgt acctccctac caatgacttg gtgtccttat tttctacccc aagagcaggg
2521 atattagctg tgtccaaatg ggttctgaat tctacagact catcaacatg aggcaaggaa
2581 tcattgaaaa ccacctgtgt ctcctttggg agaatgacat atctttagta tttacgtagc
2641 ttattcttct atatctacat atgcaaagct ttccttaaca gtaaagggta catatgcata
2701 gtgggaggag atcagacctt tacaagtgaa ggaaagcaac ttcagaaatg aattattttc
2761 tttgctttat tatttttacc aagacagaga agtattgtat tgagagataa tctattttca
2821 taatcaatat gtgcctaaat tatatttaaa tcatttcact ctgtactata ttttcaggaa
2881 ttacagaatg tggtattcat tcacttaaag gtacctctgt agaaataacc taaaactgca
2941 gaaggatctg aaagatctaa acatggtgtg cttagaaact gcagatttta gatctaatgt
3001 atactgcatt aataaatgat ataaagtgtt tgttgaaaaa aaaaaaaaaa a
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