LOCUS BC068486 3100 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens RAB6A, member RAS oncogene family, mRNA (cDNA clone
MGC:87150 IMAGE:30342562), complete cds.
ACCESSION BC068486
VERSION BC068486.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3100)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3100)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: l Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38679893.
FEATURES Location/Qualifiers
source 1..3100
/db_xref="H-InvDB:HIT000263043"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87150 IMAGE:30342562"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3100
/gene="RAB6A"
/gene_synonym="RAB6A'"
/gene_synonym="RAB6B"
/db_xref="GeneID:5870"
/db_xref="MIM:179513"
CDS 463..1089
/gene="RAB6A"
/gene_synonym="RAB6A'"
/gene_synonym="RAB6B"
/codon_start=1
/product="RAB6A protein"
/protein_id="AAH68486.1"
/db_xref="GeneID:5870"
/db_xref="MIM:179513"
/translation="MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQA
TIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQ
QTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAG
YNVKQLFRRVAAALPGMESTQDRSREDMIDIKLEKPQEQPVSEGGCSC"
BASE COUNT 888 a 661 c 647 g 904 t
ORIGIN
1 gccggcgggg ccgcaggctc gcgcccgggc tcgccccgcg ccgctccaga ggctcgcgca
61 ctcagcaggt tgggctgcgg cggcggcggc agctgtggaa gctcaggcgc tgcgcgtgag
121 aggtcccaga tacgtctgcg gttccggctc cgccaccctc agcttctctt ccccctagct
181 ttgggaagcc agaggacacc cctggctcct gccgacaccg ccctccttcc cttcccagcc
241 gcgggcctcg ctcggtgcta ggctactctg ccgggaggcg gcggcggctg ccagtctgtg
301 gagagtcctg ctgccctcca gccgggctcc tccaccgggc cttgcagggg ccgagagagc
361 tcggtgcccg cccttccgct cgcctttttc gtcagctggc tggagcagca tcggtccggg
421 aggtctctag gctgaggcgg cggccgctcc tctagttcca caatgtccac gggcggagac
481 ttcgggaatc cgctgaggaa attcaagctg gtgttcctgg gggagcaaag cgttggaaag
541 acatctttga tcaccagatt catgtatgac agttttgaca acacctatca ggcaacaatt
601 ggcattgact ttttatcaaa aactatgtac ttggaggatc gaacaatcag gcttcagctg
661 tgggatactg cgggtcagga acgtttccgt agcctcattc ccagttacat ccgtgattct
721 gctgcagctg tagtagttta cgatatcaca aatgttaact cattccagca aactacaaag
781 tggattgatg atgtcagaac agaaagagga agtgatgtta tcatcatgct agtaggaaat
841 aaaacagatc ttgctgacaa gaggcaagtg tcaattgagg agggagagag gaaagccaaa
901 gagctgaatg ttatgtttat tgaaactagt gcaaaagctg gatacaatgt aaagcagctc
961 tttcgacgtg tagcagcagc tttgccggga atggaaagca cacaggacag aagcagagaa
1021 gatatgattg acataaaact ggaaaagcct caggagcaac cagtcagtga aggaggctgt
1081 tcctgctaat ctcccatgtc atcttcaacc ttcttcagaa gctcactgct ttggccccct
1141 tactctttca ttgactgcag tgtgaatatt ggcttgaacc ttttcccttc agtaataacg
1201 tattgcaatt catcattgct gcctgtctcg tggagatgat ctattagctt cacaagcaca
1261 acaaaagtca gtgtcttcat tatttatatt ttacaaaaag ccaaaatatt tcagcatatt
1321 ccagtgataa ctttaaaaat tagatacatt ttcttaacat ttttttcttt tttaatgtta
1381 tgataatgta cttcaaaatg atggaaatct caacagtatg agtatggctt ggttaacgag
1441 cggtatgttc acagcctact ttatctctcc ttgcttttct cacctctcac ttacccccat
1501 tccctattac cctattctta cctagcctcc cccgacttcc tcaaaacaaa caagagatgg
1561 caaagcagca gttctaccaa gcccattgga attatccttt aattttacag ataccacttg
1621 ctgtaggcta cggaccaaga tgtccaaaat tattcttgag cactgataaa aattacggtc
1681 ttctttgagg tcaaaattca gccatcatgg taggcagtgc ttgaatgaga aaaggctcct
1741 ggtgcatctt caaaatgagt cctaaagaac atactgagta cttagaagta gaagaacata
1801 agatgtattt ctgactaaaa caaatggctc tttcacatgt gctttattag actctgggag
1861 agaaaattaa ccaagtgctt cagaacaggt ttttagtatt taattcttca cggtaagaaa
1921 atgaagttct aatgaactgt ttctcccaag gttttaaaat tgtcaagagt tattctgttt
1981 gtttaaaaaa taagaaacct ctttaagcaa tagattttgc ttgggttttc ttttttaaaa
2041 acataatact gtgcaggcaa ggcactgtaa aagttttaat tccttccaga agaaccagtg
2101 gaagaattta aatttggcgc tacgatcaaa actactgaat tagtagaaat aatgatgtct
2161 aaagcttacc aacaaaagaa ccctcagcag aataacaaaa actttgctca ggacatttga
2221 ggtcaaattg aagacggaaa ccggaaaccg ttttcttgta agcccctaga ggcagatcag
2281 gtaaagcata catagtagag ggaaaggaga gaatggaaat aaaactcaat attatgcaga
2341 tttatgcctt attttttagc attttttaag gttgggtctt tcaggctggt tttggtttgt
2401 attagatctg tatagtttaa ttaactggtg atttagtttt atatttaagc tacaattaat
2461 cttttttctt tggtgatatt tatttctttg cctttttttt ttttaacaac tttcaatctt
2521 cagatgtttc gttgaatcta tttagagctt caccatggca atatgtattt cccttaaaac
2581 actgcaaaca aatatactag gagtgtgccc ttttaatctt tactagttat tgtgagattg
2641 ctgtgtaagc taataaacac atttgtaaat acattgtttg caggacgaaa acttctgagt
2701 tacagctcag gaaaagcctg ctgaatttat gttgtaagca ttacttaaca cagtataaag
2761 atgaaaagac aacaaaaata tcttcatact tcctcatccc ctcattggaa caaaacctta
2821 aactgggaga accttagtcc cctctctttc ctcttcctcc tccacttccc acttattgtc
2881 accttgtaat attcagagag cacttggatt atggatctga atagagaaat gcttacagat
2941 aatcattagc ccacatacca gtagcttaaa gatgggatgg agttgtaaag tgcttttata
3001 atacaatata attgttaaag gcaagggttg actctttgtt ttattttgac atggcatgtc
3061 ctgaaataaa tattgattca atatgaaaaa aaaaaaaaaa
//