LOCUS BC068463 3034 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens ras homolog gene family, member T1, mRNA (cDNA clone
IMAGE:4839305), partial cds.
ACCESSION BC068463
VERSION BC068463.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3034)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3034)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: i Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361737.
FEATURES Location/Qualifiers
source 1..3034
/db_xref="H-InvDB:HIT000263021"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4839305"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..3034
/gene="RHOT1"
/gene_synonym="FLJ11040"
/gene_synonym="MIRO-1"
/db_xref="GeneID:55288"
CDS <1..2005
/gene="RHOT1"
/gene_synonym="FLJ11040"
/gene_synonym="MIRO-1"
/codon_start=2
/product="RHOT1 protein"
/protein_id="AAH68463.1"
/db_xref="GeneID:55288"
/translation="GGRRGGPRRPKRLAGGAVGWVLLVRGVHSVRAGGGRPPRAADMK
KDVRILLVGEPRVGKTSLIMSLVSEEFPEEVPPRAEEITIPADVTPERVPTHIVDYSE
AEQSDEQLHQEISQANVICIVYAVNNKHSIDKVTSRWIPLINERTDKDSRLPLILVGN
KSDLVEYSSMETILPIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCP
EEKEMKPACIKALTRIFKISDQDNDGTLNDAELNFFQRICFNTPLAPQALEDVKNVVR
KHISDGVADSGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLDLTPEYLFPLLK
IPPDCTTELNHHAYLFLQSTFDKHDLDRDCALSPDELKDLFKVFPYIPWGPDVNNTVC
TNERGWITYQGFLSQWTLTTYLDVQRCLEYLGYLGYSILTEQESQASAVTVTRDKKID
LQKKQTQRNVFRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKSYYAINTVYVYG
QEKYLLLHDISESEFLTEAEIICDVVCLVYDVSNPKSFEYCARIFKQHFMDSRIPCLI
VAAKSDLHEVKQEYSISPTDFCRKHKMPPPQAFTCNTADAPSKDIFVKLTTMAMYPHA
RLRCMCTCNRCTFCICQNFLNSDLLQSVKNKIFTAVLNRIISA"
BASE COUNT 927 a 589 c 656 g 862 t
ORIGIN
1 gggggggcgg cgcggcgggc cccggcggcc gaagaggctg gcaggtggcg ccgtggggtg
61 ggtgctcctg gtgagaggag tccactccgt gcgtgcgggc ggaggccggc ccccgagagc
121 cgccgacatg aagaaagacg tgcggatcct gctggtggga gaacctagag ttgggaagac
181 atcactgatt atgtctctgg tcagtgaaga atttccagaa gaggttcctc cccgggcaga
241 agaaatcacc attccagctg atgtcacccc agagagagtt ccaacacaca ttgtagatta
301 ctcagaagca gaacagagtg atgaacaact tcatcaagaa atatctcagg ctaatgtcat
361 ctgtatagtg tatgccgtta acaacaagca ttctattgat aaggtaacaa gtcgatggat
421 tcctctcata aatgaaagaa cagacaaaga cagcaggctg cctttaatat tggttgggaa
481 caaatctgat ctggtggaat atagtagtat ggagaccatc cttcctatta tgaaccagta
541 tacagaaata gaaacctgtg tggagtgttc agcgaaaaac ctgaagaaca tatcagagct
601 cttttattac gcacagaaag ctgttcttca tcctacaggg cccctgtact gcccagagga
661 gaaggagatg aaaccagctt gtataaaagc ccttactcgt atatttaaaa tatctgatca
721 agataatgat ggtactctca atgatgctga actcaacttc tttcagagga tttgtttcaa
781 cactccatta gctcctcaag ctctggagga tgtcaagaat gtagtcagaa aacatataag
841 tgatggtgtg gctgacagtg ggttgaccct gaaaggtttt ctctttttac acacactttt
901 tatccagaga gggagacacg aaactacttg gactgtgctt cgacgatttg gttatgatga
961 tgacctggat ttgacacctg aatatttgtt ccccctgctg aaaatacctc ctgattgcac
1021 tactgaatta aatcatcatg catatttatt tctccaaagc acctttgaca agcatgattt
1081 ggatagagac tgtgctttgt cacctgatga gcttaaagat ttatttaaag ttttccctta
1141 cataccttgg gggccagatg tgaataacac agtttgtacc aatgaaagag gctggataac
1201 ctaccaggga ttcctttccc agtggacgct cacgacttat ttagatgtac agcggtgcct
1261 ggaatatttg ggctatctag gctattcaat attgactgag caagagtctc aagcttcagc
1321 tgttacagtg acaagagata aaaagataga cctgcagaaa aaacaaactc aaagaaatgt
1381 gttcagatgt aatgtaattg gagtgaaaaa ctgtgggaaa agtggagttc ttcaggctct
1441 tcttggaaga aacttaatga ggcagaagaa aattcgtgaa gatcataaat cctactatgc
1501 gattaacact gtttatgtat atggacaaga gaaatacttg ttgttgcatg atatctcaga
1561 atcggaattt ctaactgaag ctgaaatcat ttgtgatgtt gtatgcctgg tatatgatgt
1621 cagcaatccc aaatcctttg aatactgtgc caggattttt aagcaacact ttatggacag
1681 cagaatacct tgcttaatcg tagctgcaaa gtcagacctg catgaagtta aacaagaata
1741 cagtatttca cctactgatt tctgcaggaa acacaaaatg cctccaccac aagccttcac
1801 ttgcaatact gctgatgccc ccagtaagga tatctttgtt aaattgacaa caatggccat
1861 gtatccccat gcccggttac gctgtatgtg cacctgcaac aggtgtacat tttgcatctg
1921 tcagaacttc ctcaactcag acttgctgca atctgtaaag aacaaaatct tcactgcagt
1981 tcttaacaga attatttctg cttaagttta gaaatgagcc agaagcggcc aggcgtggtg
2041 gctcacgcct gtaatctcag cactttcgga agccgaggtg ggtggatcac ctgagatcag
2101 gagatcgaga ccatcgtggc caacacggca cgtgacacaa gctgacctca agagctccac
2161 gttttggctt cgagcaagtt ttggtgctac tgtttttgca gttttgggct ttgctatgta
2221 caaagcatta ttgaaacagc gatgatataa aaagaaatac tgtccctacc aaaaacaaat
2281 acttttatgt acattctgaa tgctttaagt tctgctagaa ttattgagat atttatacat
2341 gcagagttac tttattaata tttgtaattc atgcataaga gtattttaat gatagttata
2401 actgcagtat tggctagcat atggaaagaa aacagctaac agccaaacta aaatggctaa
2461 attccagagg ccaaaaggga atattttgta aatatatgta catattcagg caagatatgg
2521 tctcccaagc tgagttctag aaatgatgtt tctagacatt tctaagtggt attgttagtg
2581 ctcacttggc tcactcttct aggtttaagt tagcccagag attgtattta ctcatggatc
2641 actttattta tttcacattt actcagaatg atcctttggg ttctataagg acataaggta
2701 caatttgcca ttgtctctcc atttttaaaa acatacaagt cagtgtcagc ttaccaacat
2761 gacatttttt cagtcagttg tggtaggcca gccttgaagc catcgcacag tctagaaact
2821 tgtgtagctg agtgtgcagc tcacctttaa gggtgaagtt aggtaaaagc aattagcaga
2881 ggcgttatct atgtgattat gttgcttcct tgtcagtatg ttgaatttta tagccctttc
2941 aatgaaataa aaaaaaaatt tgtatattac caatgttttt agtttaaata aagagtcacc
3001 cttactactg ttgaaaagaa aaaaaaaaaa aaaa
//