LOCUS BC068006 2003 bp mRNA linear HUM 11-APR-2007
DEFINITION Homo sapiens ELKS/RAB6-interacting/CAST family member 1, mRNA (cDNA
clone IMAGE:6142241), partial cds.
ACCESSION BC068006
VERSION BC068006.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2003)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2003)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: i Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38045897.
FEATURES Location/Qualifiers
source 1..2003
/db_xref="H-InvDB:HIT000262881"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6142241"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>2003
/gene="ERC1"
/gene_synonym="Cast2"
/gene_synonym="ELKS"
/db_xref="GeneID:23085"
/db_xref="HGNC:HGNC:17072"
/db_xref="MIM:607127"
CDS 123..>2003
/gene="ERC1"
/gene_synonym="Cast2"
/gene_synonym="ELKS"
/codon_start=1
/product="ERC1 protein"
/protein_id="AAH68006.1"
/db_xref="GeneID:23085"
/db_xref="HGNC:HGNC:17072"
/db_xref="MIM:607127"
/translation="MYGSARSVGKVEPSSQSPGRSPRLPRSPRLGHRRTNSTGGSSGS
SVGGGSGKTLSMENIQSLNAAYATSGPMYLSDHENVGSETPKSTMTLGRSGGRLPYGV
RMTAMGSSPNIASSGVASDTIAFGEHHLPPVSMASTVPHSLRQARDNTIMDLQTQLKE
VLRENDLLRKDVEVKESKLSSSMNSIKTFWSPELKKERALRKDEASKITIWKEQYRVV
QEENQHMQMTIQALQDELRIQRDLNQLFQQDSSSRTGEPCVAELTEENFQRLHAEHER
QAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKGLSAKATEEDHERTR
RLAEAEMHVHHLESLLEQKEKENSMLREEMHRRFENAPDSAKTKALQTVIEMKDSKIS
SMERGLRDLEEEIQMLKSNGALSTEEREEEMKQMEVYRSHSKFMKNKIGQVKQELSRK
DTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKET
MLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQM
SSLKERVKSLQADTTNTDTALTTLEEALAEKERTIERLKEQRDRDEREKQEEIDNYKK
KKK"
BASE COUNT 642 a 402 c 538 g 421 t
ORIGIN
1 ctggggacct tcttctgatt aaccttaaac caacttgtag ccatagagac acctcacaag
61 gttcccattt ttgttgttgt tgttgttgat tttctgctca cacctttcct gaccttgcaa
121 ccatgtatgg aagtgcccgc tctgttggga aggtggagcc gagcagccag agccctgggc
181 gttcacccag gcttccacgt tcccctcgct tgggtcaccg tcgaaccaac agtacgggag
241 ggagttcggg aagcagtgtt ggaggtggca gtgggaaaac cctttcaatg gaaaatatac
301 aatctttaaa tgctgcctat gccacctctg gccctatgta tctaagtgac catgaaaatg
361 tgggttcaga aacacctaaa agcaccatga cacttggccg ttctggggga cgtctgcctt
421 acggtgttcg gatgactgct atgggtagta gccccaatat agctagcagt ggggttgcta
481 gtgacaccat agcatttgga gagcatcacc tccctcctgt gagtatggca tccactgtac
541 ctcactccct tcgtcaggcg agagataaca caatcatgga tctgcagaca cagctgaagg
601 aagtattaag agaaaatgat ctcttgcgga aggatgtgga agtaaaggag agcaaattga
661 gttcttcaat gaatagcatc aagaccttct ggagcccaga gctgaagaag gaacgagccc
721 tgagaaaaga tgaagcttcc aaaatcacca tttggaagga acagtacaga gttgtacagg
781 aggaaaacca gcacatgcag atgacaatcc aggctctcca ggatgaattg cggatccaga
841 gggacctgaa tcagctgttt cagcaggata gtagcagcag gactggcgaa ccttgtgtag
901 cagagctgac agaggagaac tttcagaggc ttcatgctga gcatgagcgg caggccaaag
961 agctgtttct tcttcgaaag acattggagg aaatggagct gcgtattgag actcaaaagc
1021 agaccctaaa tgctcgggat gaatccatta agaagcttct ggaaatgttg cagagcaaag
1081 gactttctgc caaggctacc gaggaagacc atgagagaac aagacgactg gcagaggcag
1141 agatgcacgt tcatcaccta gaaagccttt tggagcagaa ggaaaaagag aacagtatgt
1201 tgagagagga gatgcatcga aggtttgaga atgctcctga ttctgccaaa acaaaagctc
1261 tgcaaactgt tattgagatg aaggattcaa aaatttcctc tatggagcgt gggcttcgag
1321 acctggaaga ggaaattcag atgctgaaat cgaatggtgc tttgagtact gaggaaaggg
1381 aagaagaaat gaagcaaatg gaagtgtatc ggagccattc taaatttatg aaaaataaga
1441 ttggccaggt gaaacaggag ctgtccagaa aggacacaga actactcgcc ctgcagacaa
1501 agctagaaac actcacaaac cagttctcag atagtaaaca gcacattgaa gtgttgaagg
1561 agtccttgac tgctaaggag cagagggctg ccatcctgca gactgaggtg gatgctctcc
1621 gattgcgttt ggaagagaag gaaaccatgt tgaataaaaa gacaaaacaa attcaggata
1681 tggctgaaga gaaggggaca caagctggag agatacatga cctcaaggac atgttggatg
1741 tgaaggagcg gaaggttaat gttcttcaga agaagattga aaatcttcaa gagcagctta
1801 gagacaagga aaagcagatg agcagcttga aagaacgggt caaatccttg caggctgaca
1861 ccaccaacac tgacactgcc ttgacaactt tggaggaggc ccttgcagag aaagagcgga
1921 caattgaacg cttaaaggag cagagggaca gagatgagcg agagaagcaa gaggaaattg
1981 ataactacaa aaaaaaaaaa aaa
//