LOCUS BC067881 2204 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens NIPA-like domain containing 1, mRNA (cDNA clone
MGC:87584 IMAGE:30345943), complete cds.
ACCESSION BC067881
VERSION BC067881.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2204)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2204)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: o Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46409301.
FEATURES Location/Qualifiers
source 1..2204
/db_xref="H-InvDB:HIT000262848"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87584 IMAGE:30345943"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2204
/gene="NPAL1"
/db_xref="GeneID:152519"
/db_xref="HGNC:HGNC:27194"
CDS 67..1299
/gene="NPAL1"
/codon_start=1
/product="NIPA-like domain containing 1"
/protein_id="AAH67881.1"
/db_xref="GeneID:152519"
/db_xref="HGNC:HGNC:27194"
/translation="MGAQVRLPPGEPCREGYVLSLVCPNSSQAWCEITNVSQLLASPV
LYTDLNYSINNLSISANVENKYSLYVGLVLAVSSSIFIGSSFILKKKGLLQLASKGFT
RAGQGGHSYLKEWLWWVGLLSMGAGEAANFAAYAFAPATLVTPLGALSVLISAILSSY
FLNEHLNIHGKIGCILSILGSTVMVIHAPQEEEVTSLHEMEMKLRDPGFISFAVIITV
ISLVLILIVAPKKGQTNILVYISICSLIGAFSVSSVKGLGIAIKELIEWKPVYKHPLV
FVLLAVLVLSVTTQINYLNKALDTFNTSLVTPIYYVFFTSMVVTCSAILFQEWYGMTA
GDIIGTLSGFFTIIIGIFLLHAFKNTDITWSELTSTAKKEAVSLNVNENNYVLLENLE
CSAPGYNDDVTLFSRTDD"
BASE COUNT 606 a 456 c 507 g 635 t
ORIGIN
1 gggtgcgtgt ggagaggccc aggtgaggag caagcgcccg cgttccggaa gcccgctccc
61 ggggccatgg gggcacaggt gaggctgccg cccggagagc cctgccgaga aggatatgtg
121 ctgtctctgg tctgtccaaa ctcctcccag gcttggtgtg agatcacaaa tgtgtcacag
181 ctgctggctt ctcctgtgct ctacacggac ctgaattaca gcataaacaa cttgagcatt
241 tcagcaaatg tagaaaacaa atacagtctt tatgtgggct tggtactggc agtaagctca
301 agtattttta ttggctccag cttcatactg aaaaagaagg gcctcttgca actggccagc
361 aagggcttta ctagagctgg acaaggtgga cattcttacc tgaaggaatg gctctggtgg
421 gtaggattgc tgtcaatggg agcaggagag gctgcaaatt ttgctgctta tgcttttgca
481 cctgccacct tggtcacccc tctgggtgct ttgagtgttc tcataagtgc aatattatct
541 tcctactttt taaacgagca cttgaacatt catgggaaaa taggctgcat attaagtata
601 ttggggtcaa ctgtgatggt tatccatgcc ccacaagaag aggaagtcac atctttgcat
661 gaaatggaaa tgaaattgag agacccaggg tttatttcct ttgctgtgat cataactgtg
721 atctccttgg tgctgatttt gattgtggct cccaagaaag gacagaccaa tatattggtt
781 tatatttcaa tctgttcctt gattggagcg ttttcagttt cttctgtgaa aggcctggga
841 attgccatta aggagctgat agaatggaag ccagtttaca aacatccgct ggtctttgtt
901 ttgctggctg tacttgtgct ttcagtaact acacagatta actatctcaa caaggcactg
961 gacaccttta atacctctct tgtgacaccc atttattatg tattcttcac atccatggta
1021 gtgacttgct ctgccatctt attccaagag tggtatggca tgacagctgg agatatcatt
1081 gggaccctga gtggattctt cactattatc attggcatct tccttctaca tgcttttaaa
1141 aatactgaca ttacttggag tgagcttaca tccactgcta agaaagaagc cgtctctctg
1201 aatgtcaatg aaaacaatta tgttttacta gagaacttgg agtgttcagc cccaggatac
1261 aatgatgacg ttaccttgtt tagtagaact gatgactgaa gtctctagaa acactgagtt
1321 ttaaccaata tgagacacac gaagaggaaa atgaatgctt gcttcttgga agaactgcta
1381 ggaaagttag catttttgca gttctaacta atttagatgt gaggccaagt aaaaatgcca
1441 tttttttggc cattgaattt gaaaatcaaa ttgattatcc tccagaattt ctacaaactt
1501 tgaaatactc tctaaggatc aaagaagtca aagagctatg tgtgtctcag aataatctcc
1561 ttcttctggt cacagtatct ttgtctctgc caggtggctc ttcatttctt tggtagctat
1621 ttttagactt acagtcattc accaatatac agttagcagt gttccgatag acacagtatc
1681 agtcatattc tccgttgagt cataatttca aactcaacaa gatttcagaa aggtataatc
1741 atgtaatttc tcatattaaa actgagaaga gaggccaggc atggtggttc acacctgtaa
1801 tcctagcagt ttgggaggcc aaggcggaca gatcacttga gctcaggagt tcgagaccac
1861 cttgggccac aaggcgagac cctgtctcta caaaaaatac aaaaattagc caggcgtggt
1921 ggcacatgcc tgtagttcca gccacccggg agcctgaggt gggaggattg cttgagtctg
1981 cgaggttggg gctgccgtga gcccagattg cgccattgtg ctccagcctg ggtgacaaag
2041 caaggccctg tctcaaaaaa gaagaagaga aagggccagg ggcttttgct ttaaaaaact
2101 ttttttaaaa cagaagtgaa accacgggtg ctttgttctt ccttctgcac ctccttctta
2161 aactagatag ctaattagtt attttaagaa aaaaaaaaaa aaaa
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