LOCUS BC067859 1933 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens GTF2I repeat domain containing 2, mRNA (cDNA clone
MGC:87488 IMAGE:30340785), complete cds.
ACCESSION BC067859
VERSION BC067859.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1933)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1933)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: l Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48762699.
FEATURES Location/Qualifiers
source 1..1933
/db_xref="H-InvDB:HIT000262827_04"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87488 IMAGE:30340785"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1933
/gene="GTF2IRD2"
/gene_synonym="FLJ21423"
/gene_synonym="GTF2IRD2A"
/db_xref="GeneID:84163"
/db_xref="MIM:608899"
CDS 181..1677
/gene="GTF2IRD2"
/gene_synonym="FLJ21423"
/gene_synonym="GTF2IRD2A"
/codon_start=1
/product="GTF2IRD2 protein"
/protein_id="AAH67859.1"
/db_xref="GeneID:84163"
/db_xref="MIM:608899"
/translation="MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEV
ACIAVYETDVFVVGTERGCAFVNARTDFQKDFAKYCVAEGLCEVKPPCPVNGMQVHSG
ETEILRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENY
DLATLKWILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTE
PMEDSGISLKAEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPS
EEPNEDPEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLRE
QVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRR
ILEAAEFIKFTVIRPLPGLELSNGLLEAGAGGLLEAGSLRPAWATWQDPISTKNLKIS
WKQWLTPVAPATWQAEAGGSLELRSLRQQRTIIAILHSSLGDRTRPCL"
BASE COUNT 543 a 459 c 519 g 412 t
ORIGIN
1 caaagagaaa aaggagggcg agtggcgagc aggggcctcg gccgccaccc acacgccccg
61 aagcgtgctc gtcccccgcg cggggctccc ggccgccgcc ctcggccatc ggctgctccc
121 cggtggccca ggcctcggac tccgcggccg gcccggcgcg gcccagcgcc ctcagggatc
181 atggcccagg tagcagtgtc caccctgcct gttgaagaag agtcctcctc agagaccagg
241 atggtggtga cattcctcgt gtctgccctc gaatccatgt gtaaagaact ggccaagtcc
301 aaggcagaag tggcctgcat cgcagtgtac gaaacagacg tgtttgtcgt cggaaccgag
361 agaggatgcg cttttgttaa tgccaggacg gattttcaga aagattttgc aaaatactgc
421 gttgcagagg gactgtgtga ggtgaaacct ccctgccctg tgaacgggat gcaggtccac
481 tcgggcgaaa cggaaatact caggaaggca gtggaggact atttctgctt ttgttatggt
541 aaagccttag ggacaacagt gatggtgcct gttccctatg agaagatgct gcgagaccag
601 tcggctgtgg tagtgcaggg gcttccggaa ggcgttgcct ttcaacaccc tgagaattac
661 gaccttgcaa ccctgaaatg gattttggag aacaaagcag ggatttcatt catcataaat
721 agacccttcc taggaccaga gagtcagctg ggtggccctg ggatggtaac agatgcggag
781 agatccatag tatcaccaag tgaaagctgc ggccccatca atgtgaaaac tgaacccatg
841 gaagattctg gcatttcact gaaagcagaa gctgtctcag tcaagaaaga atcagaagat
901 cctaattact atcaatataa tatgcaagga agccaccctt cttccacaag caatgaagta
961 atagaaatgg aattaccaat ggaagattcc actccgctgg tcccttcaga agaaccaaat
1021 gaggaccctg aagccgaggt gaaaatcgaa ggaaacacaa attcatccag tgttacaaat
1081 tctgcagcag gtgttgaaga tcttaacatc gttcaagtga ctgttccaga taatgagaag
1141 gaaagattat caagcattga aaagattaaa cagctaagag aacaagttaa tgacctcttt
1201 agccgaaaat ttggtgaagc aattggcgtg gatttccctg tgaaagttcc ctacaggaag
1261 atcacattca accctggctg tgtggtgatt gatggcatgc ccccgggggt ggtattcaag
1321 gcccccggct atctggaaat cagttccatg aggaggatct tggaggcagc tgagtttatc
1381 aaattcacag tcatcaggcc gcttccaggg cttgagctca gtaatggact tttggaggcc
1441 ggggcaggag gattgcttga ggccgggagt ttgaggccag cctgggcaac atggcaagac
1501 cccatctcta caaaaaattt aaaaattagc tggaaacagt ggctcacacc tgtagcccca
1561 gctacttggc aggctgaagc gggaggatcg cttgaactca ggagtttgag acagcagaga
1621 accataattg caatactgca ctccagcctg ggtgacagaa caagaccctg tctctaaaaa
1681 gaaaatgcaa acatattatc aaataattcc tgtttaaact ggacataaca agcacagcta
1741 catgctgaac ctcatcaaag gtgtcttttg tttggctcat gtacttttga aaataaggat
1801 gaggcctggc acggtggctc ctgtaatccc agcactttgg gaggccaagg cgggtggatc
1861 gcttgagcct ggggtttcag accagcctgg gcaacaaggt aagactccag ctctacaaaa
1921 aaaaaaaaaa aaa
//