LOCUS BC067818 1587 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens BCL2/adenovirus E1B 19kDa interacting protein 3, mRNA
(cDNA clone IMAGE:5299009), partial cds.
ACCESSION BC067818
VERSION BC067818.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1587)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1587)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: f Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7669480.
FEATURES Location/Qualifiers
source 1..1587
/db_xref="H-InvDB:HIT000262786"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5299009"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..1587
/gene="BNIP3"
/gene_synonym="NIP3"
/db_xref="GeneID:664"
/db_xref="MIM:603293"
CDS <1..735
/gene="BNIP3"
/gene_synonym="NIP3"
/codon_start=1
/product="BNIP3 protein"
/protein_id="AAH67818.1"
/db_xref="GeneID:664"
/db_xref="MIM:603293"
/translation="GFLRPGCGAPLSPGAQLGRGAPTSAFPPPAAEAHPAARRGLRSP
QLPSGAMSQNGAPGMQEESLQGSWVELHFSNNGNGGSVPASVSIYNGDMEKILLDAQH
ESGRSSSKSSHCDSPPRSQTPQDTNRASETDTHSIGEKNSSQSEEDDIERRKEVESIL
KKNSDWIWDWSSRPENIPPKEFLFKHPKRTATLSMRNTSVMKKGGIFSAEFLKVFLPS
LLLSHLLAIGLGIYIGRRLTTSTSTF"
BASE COUNT 475 a 337 c 334 g 441 t
ORIGIN
1 gggttcctcc ggccgggctg cggggctccg ctcagtccgg gagcgcagct gggccgcggc
61 gctccgacct ccgctttccc accgcccgca gctgaagcac atcccgcagc ccggcgcgga
121 ctccgatcgc cgcagttgcc ctctggcgcc atgtcgcaga acggagcgcc cgggatgcag
181 gaggagagcc tgcagggctc ctgggtagaa ctgcacttca gcaataatgg gaacgggggc
241 agcgttccag cctcggtttc tatttataat ggagacatgg aaaaaatact gctggacgca
301 cagcatgagt ctggacggag tagctccaag agctctcact gtgacagccc acctcgctcg
361 cagacaccac aagataccaa cagagcttct gaaacagata cccatagcat tggagagaaa
421 aacagctcac agtctgagga agatgatatt gaaagaagga aagaagttga aagcatcttg
481 aagaaaaact cagattggat atgggattgg tcaagtcggc cggaaaatat tccccccaag
541 gagttcctct ttaaacaccc gaagcgcacg gccaccctca gcatgaggaa cacgagcgtc
601 atgaagaaag ggggcatatt ctctgcagaa tttctgaaag ttttccttcc atctctgctg
661 ctctctcatt tgctggccat cggactgggg atctatattg gaaggcgtct gacaacctcc
721 accagcacct tttgatgaag aactggagtc tgacttggtt cgttagtgga ttacttctga
781 gcttgcaaca tagctcactg aagagctgtt agatcctggg gtggccacgt cacttgtgtt
841 tatttgttct gtaaatgctg cgttcctaat ttagtaaaat aaaagaatag acactaaaat
901 catgttgatc tataattaca cctatgggat caataagcat gtcagactga ttaatgtcta
961 ctgtaaaaat ttggtagtaa attttcattt gatattagat ataaatatct gaatataaat
1021 aattttaata tactagtcat gatgtgtgtt gtattttaaa aattatctgc aaccttaatt
1081 cagctgaagt actttatatt tcaaaagaat gaataacatt gataataaaa tcgctacttt
1141 aaggggtttg tccaaaataa atattgtggc cttatatatc acactattgt agaaagtatt
1201 atttaattta aatggatgca ggttgtctac taaagaaaga ttatatataa ctatgctaat
1261 tgttcataat caacagaaac caagatagag ctacaaactc agctgtacag ttcatacact
1321 aaactcttct tgcttttgca ttataaggaa ttaagtctcc gattattagg tgatcaccct
1381 ggatgatcag ttttctgctg aaggcaccta ctcagtatct tttcctcttt atcactctgc
1441 attggtgaat ttaatcctct cctttgtgtt caacttttgt gtgcttttaa aatcagcttt
1501 attctaagca aatctgtgtc tactttaaaa aactggaaat ggaaaaaaaa ataaatcttt
1561 gccaaatcct tcaaaaaaaa aaaaaaa
//