LOCUS BC067813 2420 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens laminin, gamma 1 (formerly LAMB2), mRNA (cDNA clone
IMAGE:30341665), complete cds.
ACCESSION BC067813
VERSION BC067813.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2420)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2420)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: l Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 9845497
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2420
/db_xref="H-InvDB:HIT000262781"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30341665"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2420
/gene="LAMC1"
/db_xref="GeneID:3915"
/db_xref="MIM:150290"
CDS 258..1004
/gene="LAMC1"
/codon_start=1
/product="LAMC1 protein"
/protein_id="AAH67813.1"
/db_xref="GeneID:3915"
/db_xref="MIM:150290"
/translation="MRGSHRAAPALRPRGRLWPVLAVLAAAAAAGCAQAAMDECTDEG
GRPQRCMPEFVNAAFNVTVVATNTCGTPPEEYCVQTGVTGVTKSCHLCDAGQPHLQHG
AAFLTDYNNQADTTWWQSQTMLAGVQYPSSINLTLHLGKAFDITYVRLKFHTSRPESF
AIYKRTREDGPWIPYQYYSGSCENTYSKANRGFIRTGGDEQQALCTDEFSDISPLTGG
NVAFSTLEGRPSAYNFDNSPVLQVNSHRLA"
BASE COUNT 590 a 578 c 634 g 618 t
ORIGIN
1 gtgcaggctg ctcccggggt aggtgaggga agcgcggagg cggcgcgcgg gggcagtggt
61 cggcgagcag cgcggtcctc gctaggggcg cccacccgtc agtctctccg gcgcgagccg
121 ccgccaccgc ccgcgccgga gtcaggcccc tgggccccca ggctcaagca gcgaagcggc
181 ctccggggga cgccgctagg cgagaggaac gcgccggtgc ccttgccttc gccgtgaccc
241 agcgtgcggg cggcgggatg agagggagcc atcgggccgc gccggccctg cggccccggg
301 ggcggctctg gcccgtgctg gccgtgctgg cggcggccgc cgcggcgggc tgtgcccagg
361 cagccatgga cgagtgcacg gacgagggcg ggcggccgca gcgctgcatg cccgagttcg
421 tcaacgccgc tttcaacgtg actgtggtgg ccaccaacac gtgtgggact ccgcccgagg
481 aatactgtgt gcagaccggg gtgaccgggg tcaccaagtc ctgtcacctg tgcgacgccg
541 ggcagcccca cctgcagcac ggggcagcct tcctgaccga ctacaacaac caggccgaca
601 ccacctggtg gcaaagccag accatgctgg ccggggtgca gtaccccagc tccatcaacc
661 tcacgctgca cctgggaaaa gcttttgaca tcacctatgt gcgtctcaag ttccacacca
721 gccgcccgga gagctttgcc atttacaagc gcacacggga agacgggccc tggattcctt
781 accagtacta cagtggttcc tgcgagaaca cctactccaa ggcaaaccgc ggcttcatca
841 ggacaggagg ggacgagcag caggccttgt gtactgatga attcagtgac atttctcccc
901 tcactggggg caacgtggcc ttttctaccc tggaaggaag gcccagcgcc tataactttg
961 acaatagccc tgtgctgcag gtaaattctc acaggttggc ctgaagccag ctagttctac
1021 aacatgcgag gtgtgggaag attattgtag tggggcttgt ggtcccactt ctgaggtacg
1081 gggtcagagt agaatacttg agcaacacag acagagagct cgattctgct ctctgtgtac
1141 tattaataag tgaaggaaag tagttttgtt cctgctgcct ggttgatgtt tgttcttatg
1201 cacttgcaga tctattctgg gatgtaaact ttacacattt tttaaaaagt caaacaattt
1261 taacgttagt ctctgtacct gaggtggaaa cattttcctt ctgacctttt gaagagaaca
1321 tttgtgacct aattacccag atttcttgga tcttttcttg cctatttttt gatttgacaa
1381 aataaaatgt attttttaaa attagcaaag gggaaccgtt gaagcaagat atttaagaat
1441 gccatcttct ttcattttta cacaagaaaa ttttgattag gtttgtctgg cacgattgct
1501 gatcattaaa gaaactcctc atcacctaaa atggatgatg ttagtaacag gatatggatg
1561 ttagtaacag gatattaatt taggtaccca tagcactgta cttaaacatt gtgatagaaa
1621 catttccctg tttgagaagg atttcttttt tctcctgaat tctacatcca tattccttat
1681 acaccataat acagaattct tctatgttgc tcatatttct gtgaactttt catatgtcct
1741 ggctatttga ttatggaaaa gctggtgagc ctcatgctgt actcagcact ttaacacaga
1801 attggagatg ctgctgcatg tggctgaagt caacaaccac atggggatag cctttgtcag
1861 ttgactgaaa caagaaagtc tgataatggg ttttcaaatg ctgtgtacat tatatgaaaa
1921 gctattgtga tttctaaata ggaaataccc catttttcta gggtttctaa tttggatctt
1981 cttattcttt ctcaccgtta ttatgttcag ggactctctt tctaattgta tggttttgga
2041 cagtgacaaa agataagaat atatttttct gtgggttcag ttgcccccct tccattgtat
2101 ttctgtaagt tgctgggaaa gcatgaatgt gaaagctgtt ggtaaactct gaggttatgg
2161 tgagcaatga gtgtgcttgc caacaccttg caaaaaagtg tttcttgcaa tggagataag
2221 ttgtgttcaa aataaatggc cgagagaata gctgattttg atagatgaaa aagcagggcc
2281 aggcgcagtg gctcatgcct gtaataccag cactttggga ggcggaggca ggtggatcac
2341 ttgaggtcag gcattcaaaa cccacctggc caacatggtg aaaccctgtc tctactaaaa
2401 atacaaaaaa aaaaaaaaaa
//