LOCUS BC067754 2048 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens vacuolar protein sorting 37 homolog A (S. cerevisiae),
mRNA (cDNA clone MGC:87029 IMAGE:5275060), complete cds.
ACCESSION BC067754
VERSION BC067754.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2048)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2048)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: p Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22748878.
FEATURES Location/Qualifiers
source 1..2048
/db_xref="H-InvDB:HIT000262722"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87029 IMAGE:5275060"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2048
/gene="VPS37A"
/gene_synonym="FLJ32642"
/gene_synonym="HCRP1"
/db_xref="GeneID:137492"
/db_xref="HGNC:HGNC:24928"
/db_xref="MIM:609927"
CDS 267..1460
/gene="VPS37A"
/gene_synonym="FLJ32642"
/gene_synonym="HCRP1"
/codon_start=1
/product="vacuolar protein sorting 37 homolog A (S.
cerevisiae)"
/protein_id="AAH67754.1"
/db_xref="GeneID:137492"
/db_xref="HGNC:HGNC:24928"
/db_xref="MIM:609927"
/translation="MSWLFPLTKSASSSAAGSPGGLTSLQQQKQRLIESLRNSHSSIA
EIQKDVEYRLPFTINNLTININILLPPQFPQEKPVISVYPPIRHHLMDKQGVYVTSPL
VNNFTMHSDLGKIIQSLLDEFWKNPPVLAPTSTAFPYLYSNPSGMSPYASQGFPFLPP
YPPQEANRSITSLSVADTVSSSTTSHTTAKPAAPSFGVLSNLPLPIPTVDASIPTSQN
GFGYKMPDVPDAFPELSELSVSQLTDMNEQEEVLLEQFLTLPQLKQIITDKDDLVKSI
EELARKNLLLEPSLEAKRQTVLDKYELLTQMKSTFEKKMQRQHELSEICSASALQARL
KVAAHEAEEESDNIAEDFLEGKMEIDDFLSSFMEKRTICHCRRAKEEKLQQAIAMHSQ
FHAPL"
BASE COUNT 617 a 462 c 399 g 570 t
ORIGIN
1 tgtggtcggt ttgggcgtct gggccgtgaa ggtgggacct cctgttccgg gccgcaagtt
61 tccctctcca gccgcccgcc gttcgtagca tgtcccccag aactcgggga gcgcaggcag
121 gacaggctta gagaagacgc ggtccccagc gcttgggcca cggacgtccc accccgctcc
181 tctgtcgctg gagaaccgcc gggccgagcc actgggagaa gcaggccaga gccttccagg
241 gcctccggcc cgtggacccg aggaggatga gctggctttt tcccctgacc aagagcgcct
301 cctcctccgc ggctgggtcc cccggtggcc tcaccagcct ccagcagcag aagcagcgcc
361 tgatcgagtc cctccggaac tcacactcca gtatagccga aatacagaaa gatgtggaat
421 acagattgcc attcaccata aacaacctga caattaacat taatatactg cttcctccac
481 agtttcctca ggaaaaacca gtgatcagtg tttatccacc aatacgacat cacttaatgg
541 ataaacaagg agtgtatgtt acctctccat tagtaaacaa ttttacaatg cactcagatc
601 ttggaaaaat tattcagagt ctgttggatg agttttggaa gaatcctcca gttttagctc
661 ctacttcaac agcatttcct tatctataca gtaacccaag tgggatgtct ccttatgctt
721 ctcagggttt tccatttctt cctccatatc ctccacaaga agcaaacagg agtatcactt
781 ctttatctgt tgctgacact gtttcttctt caacaacaag tcataccaca gccaagcctg
841 ccgctccttc atttggtgtc ctttcaaatc tgccattacc cattcccaca gtggatgctt
901 caataccgac aagccaaaat ggttttgggt acaagatgcc agatgtccct gatgcatttc
961 cagaactctc agaactaagt gtgtcacaac tcacagatat gaatgaacaa gaggaggtat
1021 tactagaaca gtttctgact ttgcctcaac taaaacaaat tattaccgac aaagatgact
1081 tagtaaaaag tattgaggaa ctagcaagaa aaaatctcct tttggagccc agcttggaag
1141 ccaaaagaca aactgtttta gataagtatg aattacttac acagatgaag tccactttcg
1201 aaaagaagat gcaaaggcag catgaactta gtgagatctg tagtgcaagt gcccttcagg
1261 caagattgaa agtagctgca catgaagctg aggaagaatc tgataatatt gcagaagatt
1321 tcttggaggg aaagatggaa atagatgatt ttctcagtag cttcatggaa aagagaacaa
1381 tttgccactg tagaagagcc aaggaagaga aacttcagca ggcgatagca atgcacagcc
1441 aatttcatgc tccactatag attttcctgg aaacatgaac tgccaagaga ggaatgggac
1501 acaaaaccaa acactgtttt atatttatgg tttgcaaact ggcatttcat cagtggctaa
1561 attcacagat atcctatata gattgtatac agaactgaga ctgattttgt accgattaga
1621 atgattgcta tgatctttga gaaatttttc tgcactattt gcactgaaat gtttatttat
1681 tgttgataaa ttgtatcata tttaagttcc actgctgttc ctcttacctt gattaaatgc
1741 ctatgcatgt acttttagct agtttttaat attttataaa acttcattta aatttgtatt
1801 tttaacttga agttccattt ctttatcaag gatggtattt agattttttt cctcttaacc
1861 ttttttcaaa aactattttc aactgtgagg aaacccttat ttttctttct ttgtggataa
1921 aactttcaaa agcaatttaa gatattcata gtgttaggaa acaccaaacc tgcctatgtg
1981 caatctcaca aaagaaactt ttaataccta caataaatca aaagaataaa ccaaaaaaaa
2041 aaaaaaaa
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