LOCUS BC067746 2701 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens C-type lectin domain family 1, member A, mRNA (cDNA
clone MGC:87010 IMAGE:30337675), complete cds.
ACCESSION BC067746
VERSION BC067746.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2701)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2701)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: k Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37577102.
FEATURES Location/Qualifiers
source 1..2701
/db_xref="H-InvDB:HIT000262714"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87010 IMAGE:30337675"
/tissue_type="Placenta, pre-eclamptic"
/clone_lib="NIH_MGC_148"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2701
/gene="CLEC1A"
/gene_synonym="CLEC1"
/gene_synonym="MGC34328"
/db_xref="GeneID:51267"
/db_xref="HGNC:HGNC:24355"
/db_xref="MIM:606782"
CDS 64..906
/gene="CLEC1A"
/gene_synonym="CLEC1"
/gene_synonym="MGC34328"
/codon_start=1
/product="C-type lectin domain family 1, member A"
/protein_id="AAH67746.1"
/db_xref="GeneID:51267"
/db_xref="HGNC:HGNC:24355"
/db_xref="MIM:606782"
/translation="MQAKYSSTRDMLDDDGDTTMSLHSQASATTRHPEPRRTEHRAPS
STWRPVALTLLTLCLVLLIGLAALGLLFFQYYQLSNTGQDTISQMEERLGNTSQELQS
LQVQNIKLAGSLQHVAEKLCRELYNKAGAHRCSPCTEQWKWHGDNCYQFYKDSKSWED
CKYFCLSENSTMLKINKQEDLEFAASQSYSEFFYSYWTGLLRPDSGKAWLWMDGTPFT
SELFHIIIDVTSPRSRDCVAILNGMIFSKDCKELKRCVCERRAGMVKPESLHVPPETL
GEGD"
BASE COUNT 794 a 561 c 548 g 798 t
ORIGIN
1 acagtagccc ggcggcccag ggcaatccga ccacatttca ctctcaccgc tgtaggaatc
61 cagatgcagg ccaagtacag cagcacgagg gacatgctgg atgatgatgg ggacaccacc
121 atgagcctgc attctcaagc ctctgccaca actcggcatc cagagccccg gcgcacagag
181 cacagggctc cctcttcaac gtggcgacca gtggccctga ccctgctgac tttgtgcttg
241 gtgctgctga tagggctggc agccctgggg cttttgtttt ttcagtacta ccagctctcc
301 aatactggtc aagacaccat ttctcaaatg gaagaaagat taggaaatac gtcccaagag
361 ttgcaatctc ttcaagtcca gaatataaag cttgcaggaa gtctgcagca tgtggctgaa
421 aaactctgtc gtgagctgta taacaaagct ggagcacaca ggtgcagccc ttgtacagaa
481 caatggaaat ggcatggaga caattgctac cagttctata aagacagcaa aagttgggag
541 gactgtaaat atttctgcct tagtgaaaac tctaccatgc tgaagataaa caaacaagaa
601 gacctggaat ttgccgcgtc tcagagctac tctgagtttt tctactctta ttggacaggg
661 cttttgcgcc ctgacagtgg caaggcctgg ctgtggatgg atggaacccc tttcacttct
721 gaactgttcc atattataat agatgtcacc agcccaagaa gcagagactg tgtggccatc
781 cttaatggga tgatcttctc aaaggactgc aaagaattga agcgttgtgt ctgtgagaga
841 agggcaggaa tggtgaagcc agagagcctc catgtccccc ctgaaacatt aggcgaaggt
901 gactgattcg ccctctgcaa ctacaaatag cagagtgagc caggcggtgc caaagcaagg
961 gctagttgag acattgggaa atggaacata atcaggaaag actatctctc tgactagtac
1021 aaaatgggtt ctcgtgtttc ctgttcagga tcaccagcat ttctgagctt gggtttatgc
1081 acgtatttaa cagtcacaag aagtcttatt tacatgccac caaccaacct cagaaaccca
1141 taatgtcatc tgccttcttg gcttagagat aacttttagc tctctttctt ctcaatgtct
1201 aatatcacct ccctgttttc atgtcttcct tacacttggt ggaataagaa actttttgaa
1261 gtagaggaaa tacattgagg taacatcctt ttctctgaca gtcaagtagt ccatcagaaa
1321 ttggcagtca cttcccagat tgtaccagca aatacacaag gaattctttt tgtttgtttc
1381 agttcatact agtcccttcc caatccatca gtaaagaccc catctgcctt gtccatgccg
1441 tttcccaaca gggatgtcac ttgatatgag aatctcaaat ctcaatgcct tataagcatt
1501 ccttcctgtg tccattaaga ctctgataat tgtctcccct ccataggaat ttctcccagg
1561 aaagaaatat atccccatct ccgtttcata tcagaactac cgtccccgat attcccttca
1621 gagagattaa agaccagaaa aaagtgagcc tcttcatctg cacctgtaat agtttcagtt
1681 cctattttct tccattgacc catatttata cctttcaggt actgaagatt taataataat
1741 aaatgtaaat actgtgaagt gtgtgtgatt ttacaatgga cttatggttg gtgggaaaat
1801 tcagcatgga aatgcttttc aaaatatgat agcggtcatt attttgattg tgccttactg
1861 aaagtttttg gggaatttac aagagtactg attacatgat tatctggaga aaataagatg
1921 tctttgaaat acatgttggc ttcaagaaaa cagttttaac gttttcctaa aatgaaatct
1981 tttgaggtga gcttatggca tcaacacatg gttgatgagg aagctgagtt gcattagtgc
2041 acatgatttc cagtcaggtc atgggaaatg aacagagaca gtgacatctt tgtagctgct
2101 cctttgtgag gcacttcttt cttgagatga ctccatgcac aaatataaca gggatcattg
2161 ggaatgacac catcacagcc accaagttta ttggtttact gataaatcaa ttttgagggt
2221 tttatgctag aaaagataac attataaatc tttgtttttc aacagtggaa actgaggtgc
2281 ttcagttttg tttttcataa acatctatct catggtaaaa tgacgtatag tagcaatcat
2341 atgatagaaa gaacacattg gtgctcattt tcataaactt cattttgtta gattgtcact
2401 tagcaaagac tattgcggat tcttccttga gaactttcct ttcaattttc tgttgatttc
2461 cttaaaattt tcttcagggt cgagcaagtt ctgttgatat attgtgtcat gcaaagaaaa
2521 ctgtatttgt ggttagaaaa tgaagatttt agacctctta ttctgattta cttattaggc
2581 aagtcacttt acttcatgaa acctatttca ctgcatatga agtagaaata attataattt
2641 cctcataatg ttactgttag ctgaaataaa gtaaatgtga aatcaaaaaa aaaaaaaaaa
2701 a
//