LOCUS BC067357 2168 bp mRNA linear HUM 30-MAR-2004
DEFINITION Homo sapiens cytoskeleton-associated protein 4, mRNA (cDNA clone
IMAGE:6082888), partial cds.
ACCESSION BC067357
VERSION BC067357.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2168)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2168)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (15-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: k Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19920316.
FEATURES Location/Qualifiers
source 1..2168
/db_xref="H-InvDB:HIT000262561"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6082888"
/tissue_type="Pancreas, ductal carcinoma"
/clone_lib="NIH_MGC_110"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2168
/gene="CKAP4"
/gene_synonym="CLIMP-63"
/gene_synonym="P63"
/db_xref="GeneID:10970"
CDS <1..1803
/gene="CKAP4"
/gene_synonym="CLIMP-63"
/gene_synonym="P63"
/codon_start=1
/product="CKAP4 protein"
/protein_id="AAH67357.1"
/db_xref="GeneID:10970"
/translation="FGTRSHGARSPPSPRPEPPPRPPCPRPNKGAPRAATAPRAPRRR
VPTRRAARMTWRRSRRRRRSSRRRRPRRTRSSTRSSTRRTRRTARAATAAAASCSRRL
GRALNFLFYLALVAAAAFSGWCVHHVLEEVQQVRRSHQDFSRQREELGQGLQGVEQKV
QSLQATFGTFESILRSSQHKQDLTEKAVKQGESEVSRISEVLQKLQNEILKDLSDGIH
VVKDARERDFTSLENTVEERLTELTKSINDNIAIFTEVQKRSQKEINDMKAKVASLEE
SEGNKQDLKALKEAVKEIQTSAKSREWDMEALRSTLQTMESDIYTEVRELVSLKQEQQ
AFKEAADTERLALQALTEKLLRSEESVSRLPEEIRRLEEELRQLKSDSHGPKEDGGFR
HSEAFEALQQKSQGLDSRLQHVEDGVLSMQVASARQTESLESLLSKSQEHEQRLAALQ
GRLEGLGSSEADQDGLASTVRSLGETQLVLYGDVEELKRSVGELPSTVESLQKVQEQV
HTLLSQDQAQAARLPPQDFLDRLSSLDNLKASVSQVEADLKMLRTAVDSLVAYSVKIE
TNENNLESAKGLLDDLRNDLDRLFVKVEKIHEKV"
BASE COUNT 524 a 608 c 659 g 377 t
ORIGIN
1 ttcggcacga ggagccatgg ggctcgctcg cctcccagcc cgcggcccga gccgccgccg
61 cgcccgccat gccctcggcc aaacaaaggg gctccaaggg cggccacggc gccgcgagcc
121 cctcggagaa gggtgcccac ccgtcgggcg gcgcggatga cgtggcgaag aagccgccgc
181 cggcgccgca gcagccgccg ccgccgcccg cgccgcaccc gcagcagcac ccgcagcagc
241 acccgcagaa ccaggcgcac ggcaagggcg gccaccgcgg cggcggcgtc ctgctcgcgc
301 aggctcggca gggcgctcaa ctttctcttc tacctcgccc tggtggcggc ggccgctttc
361 tcgggctggt gcgtccacca cgtcctggag gaggtccagc aggtccggcg cagccaccag
421 gacttctccc ggcagaggga ggagctgggc cagggcttgc agggcgtcga gcagaaggtg
481 cagtctttgc aagccacatt tggaactttt gagtccatct tgagaagctc ccaacataaa
541 caagacctca cagagaaagc tgtgaagcaa ggggagagtg aggtcagccg gatcagcgaa
601 gtgctgcaga aactccagaa tgagattctc aaagacctct cggatgggat ccatgtggtg
661 aaggacgccc gggagcggga cttcacgtcc ctggagaaca cggtggagga gcggctgacg
721 gagctcacca aatccatcaa cgacaacatc gccatcttca cagaagtcca gaagaggagc
781 cagaaggaga tcaatgacat gaaggcaaag gttgcctccc tggaagaatc tgaggggaac
841 aagcaggatt tgaaagcctt aaaggaagct gtgaaggaga tacagacctc agccaagtcc
901 agagagtggg acatggaggc cctgagaagt acccttcaga ctatggagtc tgacatctac
961 accgaggtcc gcgagctggt gagcctcaag caggagcagc aggctttcaa ggaggcggcc
1021 gacacggagc ggctcgccct gcaggccctc acggagaagc ttctcaggtc tgaggagtcc
1081 gtctcccgcc tcccggagga gatccggaga ctggaggaag agctccgcca gctgaagtcc
1141 gattcccacg ggccgaagga ggacggaggc ttcagacact cggaagcctt tgaggcactc
1201 cagcaaaaga gtcagggact ggactccagg ctccagcacg tggaggatgg ggtgctctcc
1261 atgcaggtgg cttctgcgcg ccagaccgag agcctggagt ccctcctgtc caagagccag
1321 gagcacgagc agcgcctggc cgccctgcag gggcgcctgg aaggcctcgg gtcctcagag
1381 gcagaccagg atggcctggc cagcacggtg aggagcctgg gcgagaccca gctggtgctc
1441 tacggtgacg tggaggagct gaagaggagt gtgggcgagc tccccagcac cgtggaatca
1501 ctccagaagg tgcaggagca ggtgcacacg ctgctcagtc aggaccaagc ccaggccgcc
1561 cgtctgcctc ctcaggactt cctggacaga ctttcttctc tagacaacct gaaagcctca
1621 gtcagccaag tggaggcgga cttgaaaatg ctcaggactg ctgtggacag tttggttgca
1681 tactcggtca aaatagaaac caacgagaac aatctggaat cagccaaggg tttactagat
1741 gacctgagga atgatctgga taggttgttt gtgaaagtgg agaagattca cgaaaaggtc
1801 taaatgaatt gcgtgtgcag ggcgcggatt taaagtccaa tttctcatga ccaaaaaatg
1861 tgtggttttt tcccatgtgt cccctacccc ccaatttctt gtcccctctt aaagagcagt
1921 tgtcaccacc tgaacaccaa ggcattgtat tttcatgccc agttaactta tttacaatat
1981 ttaagttctc tgcttctgca tttggttggt ttcctgaagc gcagcccctg tgaataacag
2041 gtggcttttc atggatgtct ctagtcagag aaaaatgata aaggcttaaa ttgaggatta
2101 acagaagcag attaacctca gaaatcctgt ctggctggca gatttcaagt aaaaaaaaaa
2161 aaaaaaaa
//