LOCUS BC067223 1697 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens lactate dehydrogenase A, mRNA (cDNA clone MGC:72033
IMAGE:4096518), complete cds.
ACCESSION BC067223
VERSION BC067223.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1697)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1697)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: e Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5031856.
FEATURES Location/Qualifiers
source 1..1697
/db_xref="H-InvDB:HIT000262474"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:72033 IMAGE:4096518"
/tissue_type="Bone marrow, chronic myelogenous leukemia"
/clone_lib="NIH_MGC_54"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1697
/gene="LDHA"
/gene_synonym="LDH-M"
/gene_synonym="LDH1"
/gene_synonym="PIG19"
/db_xref="GeneID:3939"
/db_xref="HGNC:HGNC:6535"
/db_xref="MIM:150000"
CDS 103..1101
/gene="LDHA"
/gene_synonym="LDH-M"
/gene_synonym="LDH1"
/gene_synonym="PIG19"
/codon_start=1
/product="lactate dehydrogenase A"
/protein_id="AAH67223.1"
/db_xref="GeneID:3939"
/db_xref="HGNC:HGNC:6535"
/db_xref="MIM:150000"
/translation="MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDL
ADELALVDVIEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQE
GESRLNLVQRNVNIFKFIIPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIG
SGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDL
GTDKDKEQWKEVHKQVVESAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTM
IKGLYGIKDDVFLSVPCILGQNGISDLVKVTLTSEEEARLKKSADTLWGIQKELQF"
BASE COUNT 487 a 342 c 393 g 475 t
ORIGIN
1 gggggtgctg cagccgctgc cgccgattcc ggatctcatt gccacgcgcc cccgacgacc
61 gcccgacgtg cattcccgat tccttttggt tccaagtcca atatggcaac tctaaaggat
121 cagctgattt ataatcttct aaaggaagaa cagacccccc agaataagat tacagttgtt
181 ggggttggtg ctgttggcat ggcctgtgcc atcagtatct taatgaagga cttggcagat
241 gaacttgctc ttgttgatgt catcgaagac aaattgaagg gagagatgat ggatctccaa
301 catggcagcc ttttccttag aacaccaaag attgtctctg gcaaagacta taatgtaact
361 gcaaactcca agctggtcat tatcacggct ggggcacgtc agcaagaggg agaaagccgt
421 cttaatttgg tccagcgtaa cgtgaacatc tttaaattca tcattcctaa tgttgtaaaa
481 tacagcccga actgcaagtt gcttattgtt tcaaatccag tggatatctt gacctacgtg
541 gcttggaaga taagtggttt tcccaaaaac cgtgttattg gaagtggttg caatctggat
601 tcagcccgat tccgttacct gatgggggaa aggctgggag ttcacccatt aagctgtcat
661 gggtgggtcc ttggggaaca tggagattcc agtgtgcctg tatggagtgg aatgaatgtt
721 gctggtgtct ctctgaagac tctgcaccca gatttaggga ctgataaaga taaggaacag
781 tggaaagagg ttcacaagca ggtggttgag agtgcttatg aggtgatcaa actcaaaggc
841 tacacatcct gggctattgg actctctgta gcagatttgg cagagagtat aatgaagaat
901 cttaggcggg tgcacccagt ttccaccatg attaagggtc tttacggaat aaaggatgat
961 gtcttcctta gtgttccttg cattttggga cagaatggaa tctcagacct tgtgaaggtg
1021 actctgactt ctgaggaaga ggcccgtttg aagaagagtg cagatacact ttgggggatc
1081 caaaaggagc tgcaatttta aagtcttctg atgtcatatc atttcactgt ctaggctaca
1141 acaggattct aggtggaggt tgtgcatgtt gtccttttta tctgatctgt gattaaagca
1201 gtaatatttt aagatggact gggaaaaaca tcaactcctg aagttagaaa taagaatggt
1261 ttgtaaaatc cacagctata tcctgatgct ggatggtatt aatcttgtgt agtcttcaac
1321 tggttagtgt gaaatagttc tgccacctct gacgcaccac tgccaatgct gtacgtactg
1381 catttgcccc ttgagccagg tggatgttta ccgtgtgtta tataacttcc tggctccttc
1441 actgaacatg cctagtccaa cattttttcc cagtgagtca catcctggga tccagtgtat
1501 aaatccaata tcatgtcttg tgcataattc ttccaaagga tcttattttg tgaactatat
1561 cagtagtgta cattaccata taatgtaaaa agatctacat acaaacaatg caaccaacta
1621 tccaagtgtt ataccaacta aaacccccaa taaaccttga acagtgaaca aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaa
//