LOCUS BC067115 3350 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens microtubule-associated protein 1S, mRNA (cDNA clone
IMAGE:5768192), partial cds.
ACCESSION BC067115
VERSION BC067115.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3350)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3350)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: o Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50428934.
FEATURES Location/Qualifiers
source 1..3350
/db_xref="H-InvDB:HIT000262449"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5768192"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..3350
/gene="MAP1S"
/gene_synonym="FLJ10669"
/gene_synonym="MAP8"
/gene_synonym="VCY2IP-1"
/db_xref="GeneID:55201"
/db_xref="HGNC:HGNC:15715"
/db_xref="MIM:607573"
CDS <1..3186
/gene="MAP1S"
/gene_synonym="FLJ10669"
/gene_synonym="MAP8"
/gene_synonym="VCY2IP-1"
/codon_start=1
/product="MAP1S protein"
/protein_id="AAH67115.1"
/db_xref="GeneID:55201"
/db_xref="HGNC:HGNC:15715"
/db_xref="MIM:607573"
/translation="PKMAAVAGSGAAAAPSSLLLVVGSEFGSPGLLTYVLEELERGIR
SWDVDPGVCNLDEQLKVFVSRHSATFSSIVKGQRSLHHRGDNLETLVLLNPSDKSLYD
ELRNLLLDPASHKLLVLAGPCLEETGELLLQTGGFSPHHFLQVLKDREIRDILATTPP
PVQPPILTITCPTFGDWAQLAPAVPGLQGALRLQLRLNPPAQLPNSEGLCEFLEYVAE
SLEPPSPFELLEPPTSGGFLRLGRPCCYIFPGGLGDAAFFAVNGFTVLVNGGSNPKSS
FWKLVRHLDRVDAVLVTHPGADSLPGLNSLLRRKLAERSEVAAGGGSWDDRLRRLISP
NLGVVFFNACEAASRLARGEDEAELALSLLAQLGITPLPLSRGPVPAKPTVLFEKMGV
GRLDMYVLHPPSAGAERTLASVCALLVWHPAGPGEKVVRVLFPGCTPPACLLDGLVRL
QHLRFLREPVVTPQDLEGPGRAESKESVGSRDSSKREGLLATHPRPGQERPGVARKEP
ARAEAPRKTEKEAKTPRELKKDPKPSVSRTQPREVRRAASSVPNLKKTNAQAAPKPRK
APSTSHSGFPPVANGPRSPPSLRCGEASPPSAACGSPASQLVATPSLELGPIPAGEEK
ALELPLAASSIPRPRTPSPESHRSPAEGSERLSLSPLRGGEAGPDASPTVTTPTVTTP
SLPAEVGSPHSTEVDESLSVSFEQVLPPSAPTSEAGLSLPLRGPRARRSASPHDVDLC
LVSPCEFEHRKAVPMAPAPASPGSSNDSSARSQERAGGLGAEETPPTSVSESLPTLSD
SDPVPLAPGAADSDEDTEGFGVPRHDPLPDPLKVPPPLPDPSSICMVDPEMLPPKTAR
QTENVSRTRKPLARPNSRAAAPKATPVAAAKTKGLAGGDRASRPLSARSEPSEKGGRA
PLSRKSSTPKTATRGPSGSASSRPGVSATPPKSPVYLDLAYLPSGSSAHLVDEEFFQR
VRALCYVISGQDQRKEEGMRAVLDALLASKQHWDRDLQVTLIPTFDSVAMHTWYAETH
ARHQALGITVLGSNSMVSMQDDAFPACKVEF"
BASE COUNT 631 a 1196 c 1025 g 498 t
ORIGIN
1 ccgaagatgg cggcggtggc tggatctggg gctgccgcgg ctccgagctc actgctcctc
61 gtggtgggca gcgagttcgg gagcccgggg ctcctcacct acgtcctgga ggagctcgaa
121 agaggcatcc ggtcttggga tgtcgatcct ggcgtctgca accttgatga acagctcaag
181 gtctttgtgt cccgacactc tgccaccttc tccagcattg tgaaaggcca gcggagcctg
241 caccaccgtg gagacaacct ggagaccctg gtcctcctga acccatcaga caagtccctg
301 tatgatgagc tccggaacct tctgttggac cctgcctctc acaagctact ggtgttggct
361 gggccctgcc tggaggagac gggggagctg ctgctacaga cagggggctt ctcgcctcac
421 cacttcctcc aggtcctgaa ggacagagag atccgggaca tcctggccac cacgccccca
481 cctgtgcagc cgcccatact caccatcacc tgccccacct tcggtgactg ggctcagctg
541 gcacccgctg tgcctggcct tcagggggcg ctccggctcc agctgcggct gaaccccccg
601 gcgcagctgc ccaactctga gggcctgtgc gaattcctgg agtacgtggc tgagtctctg
661 gagccaccgt cccccttcga gctgctggag cccccgacct ccgggggctt cctcaggctg
721 ggccggccct gctgctacat cttccctgga ggcctcgggg atgccgcctt cttcgccgtc
781 aatggcttca ctgtgctggt caacggtggc tcaaacccca agtccagttt ctggaagctg
841 gtgcggcacc tggaccgcgt ggatgccgtg ctggtgaccc accctggcgc cgacagcctc
901 cccggcctca acagcctgct gcggcgcaaa ctggcggagc gctccgaggt ggctgctggt
961 gggggctcct gggacgacag gctgcgcagg ctcatctccc ccaacctggg ggtcgtgttc
1021 ttcaacgcct gcgaggccgc gtcgcggctg gcgcgcggcg aggatgaggc ggagctggcg
1081 ctgagcctcc tggcgcagct gggcatcacg cctctgccac tcagccgcgg ccccgtgcca
1141 gccaaaccca ccgtgctctt cgagaagatg ggcgtgggcc ggctggacat gtatgtgctg
1201 cacccgccct ccgccggcgc cgagcgcacg ctggcctctg tgtgcgccct gctggtgtgg
1261 caccccgccg gccccggcga gaaggtggtg cgcgtgctgt tccccggttg caccccgccc
1321 gcctgcctcc tggacggcct ggtccgcctg cagcacttga ggttcctgcg agagcccgtg
1381 gtgacgcccc aggacctgga ggggccgggg cgagccgaga gcaaagagag cgtgggctcc
1441 cgggacagct cgaagagaga gggcctcctg gccacccacc ctagacctgg ccaggagcgc
1501 cctggggtgg cccgcaagga gccagcacgg gctgaggccc cacgcaagac tgagaaagaa
1561 gccaagaccc cccgggagtt gaagaaagac cccaaaccga gtgtctcccg gacccagccg
1621 cgggaggtgc gccgggcagc ctcttctgtg cccaacctca agaagacgaa tgcccaggcg
1681 gcacccaagc cccgcaaagc gcccagcacg tcccactctg gcttcccgcc ggtggcaaat
1741 ggaccccgca gcccgcccag cctccgatgt ggagaagcca gcccccccag tgcagcctgc
1801 ggctctccgg cctcccagct ggtggccacg cccagcctgg agctggggcc gatcccagcc
1861 ggggaggaga aggcactgga gctgcctttg gccgccagct caatcccaag gccacgcaca
1921 ccctcccctg agtcccaccg gagccccgca gagggcagcg agcggctgtc gctgagccca
1981 ctgcggggcg gggaggccgg gccagacgcc tcacccacag tgaccacacc cacggtgacc
2041 acgccctcac tacccgcaga ggtgggctcc ccgcactcga ccgaggtgga cgagtccctg
2101 tcggtgtcct ttgagcaggt gctgccgcca tccgccccca ccagtgaggc tgggctgagc
2161 ctcccgctgc gtggcccccg ggcgcggcgc tcggcttccc cacacgatgt ggacctgtgc
2221 ctggtgtcac cctgtgaatt tgagcatcgc aaggcggtgc caatggcacc ggcacctgcg
2281 tcccccggca gctcgaatga cagcagtgcc cggtcacagg aacgggcagg tgggctgggg
2341 gccgaggaga cgccacccac atcggtcagc gagtccctgc ccaccctgtc tgactcggat
2401 cccgtgcccc tggcccccgg tgcggcagac tcagacgaag acacagaggg ctttggagtc
2461 cctcgccacg accctttgcc tgaccccctc aaggtccccc caccactgcc tgacccatcc
2521 agcatctgca tggtggaccc cgagatgctg ccccccaaga cagcacggca aacggagaac
2581 gtcagccgca cccggaagcc cctggcccgc cccaactcac gcgctgccgc ccccaaagcc
2641 actccagtgg ctgctgccaa aaccaagggg cttgctggtg gggaccgtgc cagccgacca
2701 ctcagtgccc ggagtgagcc cagtgagaag ggaggccggg cacccctgtc cagaaagtcc
2761 tcaaccccca agactgccac tcgaggcccg tcggggtcag ccagcagccg gcccggggtg
2821 tcagccaccc cacccaagtc cccggtctac ctggacctgg cctacctgcc cagcgggagc
2881 agcgcccacc tggtggatga ggagttcttc cagcgcgtgc gcgcgctctg ctacgtcatc
2941 agtggccagg accagcgcaa ggaggaaggc atgcgggccg tcctggacgc gctactggcc
3001 agcaagcagc attgggaccg tgacctgcag gtgaccctga tccccacttt cgactcggtg
3061 gccatgcata cgtggtacgc agagacgcac gcccggcacc aggcgctggg catcacggtg
3121 ttgggcagca acagcatggt gtccatgcag gatgacgcct tcccggcctg caaggtggag
3181 ttctagcccc atcgccgaca cgccccccac tcagcccagc ccgcctgtcc ctagattcag
3241 ccacatcaga aataaactgt gactacaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3301 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//