LOCUS BC067108 2060 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens sterol carrier protein 2, mRNA (cDNA clone MGC:74732
IMAGE:5176900), complete cds.
ACCESSION BC067108
VERSION BC067108.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2060)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2060)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 135 Row: c Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56243511.
FEATURES Location/Qualifiers
source 1..2060
/db_xref="H-InvDB:HIT000262443"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74732 IMAGE:5176900"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2060
/gene="SCP2"
/gene_synonym="NLTP"
/gene_synonym="NSL-TP"
/gene_synonym="SCPX"
/db_xref="GeneID:6342"
/db_xref="HGNC:HGNC:10606"
/db_xref="MIM:184755"
CDS 80..1048
/gene="SCP2"
/gene_synonym="NLTP"
/gene_synonym="NSL-TP"
/gene_synonym="SCPX"
/codon_start=1
/product="sterol carrier protein 2"
/protein_id="AAH67108.1"
/db_xref="GeneID:6342"
/db_xref="HGNC:HGNC:10606"
/db_xref="MIM:184755"
/translation="MSSSPWEPATLRRVFVVGVGMTKFVKPGAENSRDYPDLAEEAGK
KALADAQIPYSAVDQACVGYVFGVAECVLALGFEKMSKGSLGIKFSDRTIPTDKHVDL
LINKYGLSAHPVAPQMFGYAGKEHMEKYGTKIEHFAKIGWKNHKHSVNNPYSQFQDEY
SLDEVMASKEVFDFLTILQCCPTSDGAAAAILASEAFVQKYGLQSKAVEILAQEMMTD
LPSSFEEKSIIKMVGFDMSKEAARKCYEKSGLTPNDIDVIELHDCFSTNELLTYEALG
LCPEGQGATLVDRGDNTYGGKWVINPSGGLISKGHPLGATGGHSCS"
BASE COUNT 620 a 420 c 420 g 600 t
ORIGIN
1 gggagctctg gtgcagtctc cgcctgtcag tgccggcagt cgtccgcggc gcccgccccg
61 gtcccgcact ggtgcagcca tgtcctcttc cccgtgggag cctgcgaccc tgcgccgggt
121 gttcgtggtg ggggttggca tgaccaagtt tgtgaagcct ggagctgaga attcaagaga
181 ctaccctgac ttggcagaag aagcaggcaa gaaggcttta gctgatgcac agatccctta
241 ttcagcagtg gaccaggcat gtgttggcta tgtttttggt gtggcagaat gtgtcttggc
301 tcttgggttt gagaagatga gtaagggaag ccttggaata aaattttcag atagaaccat
361 tcccactgat aagcatgttg acctcctgat caataagtat ggattgtctg ctcacccagt
421 tgctcctcag atgtttgggt atgctggaaa agaacatatg gaaaaatatg gaacaaaaat
481 tgaacacttt gcaaaaattg gatggaaaaa tcataaacat tcagttaata acccgtattc
541 ccagttccaa gatgaataca gtttagatga agtgatggca tctaaagaag tttttgattt
601 tttgactatc ttacaatgtt gtcccacttc agatggtgct gcagcagcaa ttttggccag
661 tgaagcattt gtacagaagt atggcctgca atccaaagct gtggaaattt tggcacaaga
721 aatgatgact gatttgccaa gctcgtttga agaaaaaagc attattaaaa tggttggctt
781 tgatatgagt aaagaagctg caagaaaatg ctatgagaaa tctggcctga caccaaatga
841 tattgacgta atagaacttc acgattgctt ttctaccaac gaactcctta cttatgaagc
901 actgggactc tgtccagaag gacaaggtgc aacgctggtt gatagaggag ataatacata
961 tggaggaaag tgggtcataa atcctagtgg tggactgatt tcaaagggac acccactagg
1021 cgctacagga ggacattcct gctcttgaaa tttcctgata acccggacaa gttcatggaa
1081 agcttgatct acattcatcc taatctttgc tgatgcctcc atgtatgtta ccttaagttg
1141 ccgtgctaac tgccgtcctt cttcctgtgt tacctgtctt tgatgatcca gatctgcttt
1201 attaccaatt aaaatcattg ggaactcatc acgatccttt actctgagaa tctgtctttg
1261 aaacttatag atttcttcaa aactgcctct atctgtgact gaaaagacca acaggaagcc
1321 ctcgccagtc ctcatatact gttctctcat ggctccaagc tcttcttgtc ctgcttatcc
1381 aaaatatcta gccgggctgc tctgtcatct atcacacact gctttgtgta agaatcttca
1441 ttggttggat cataatccgt tacaaaatag gactcccaac ttaggaaaca aaacatttgt
1501 aatatgattg aagactcctg catgcctcct caataatatt cccctctctc ctcccccaac
1561 accaagaggt aatcaatatc ctgaatttgg tatctgtcat tctcatgcat ttatacaaca
1621 ttagtaatca tatgatagta ttcctaagct atgttttgga gaggacacca ctgcaaatct
1681 tcagccctgt actagctttt atcggtagcc atcaattgca gttttaatag aaatacaaat
1741 acatcaagtg tctgttcttt aatttgtaaa gaaaatttgt tttctagcgt gacaccctca
1801 aggtaccgta tctgtatgta aatgttgtgc ccaatgctac acagacatta ttttaaaact
1861 attttctgcc tttggtaaat agactaaact gttttcttta ttcctcaaaa gaattagatc
1921 atacttcagt gttgattttg ttgctaatgg gacatggaga tgtctggatg ataataaata
1981 ttcctgtggt atggtcactg aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2041 aaaaaaaaaa aaaaaaaaaa
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