LOCUS BC067085 2009 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens huntingtin interacting protein 1 related, mRNA (cDNA
clone MGC:71280 IMAGE:6085487), complete cds.
ACCESSION BC067085
VERSION BC067085.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2009)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2009)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: k Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48762941.
FEATURES Location/Qualifiers
source 1..2009
/db_xref="H-InvDB:HIT000262420"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71280 IMAGE:6085487"
/tissue_type="Pancreas, ductal carcinoma"
/clone_lib="NIH_MGC_110"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2009
/gene="HIP1R"
/gene_synonym="FLJ14000"
/gene_synonym="HIP12"
/gene_synonym="HIP3"
/gene_synonym="ILWEQ"
/gene_synonym="KIAA0655"
/db_xref="GeneID:9026"
/db_xref="HGNC:HGNC:18415"
/db_xref="MIM:605613"
CDS 63..1910
/gene="HIP1R"
/gene_synonym="FLJ14000"
/gene_synonym="HIP12"
/gene_synonym="HIP3"
/gene_synonym="ILWEQ"
/gene_synonym="KIAA0655"
/codon_start=1
/product="HIP1R protein"
/protein_id="AAH67085.1"
/db_xref="GeneID:9026"
/db_xref="HGNC:HGNC:18415"
/db_xref="MIM:605613"
/translation="MNSIKNVPARVLSRRPGHSLEAEREQFDKTQAISISKAINTQEA
PVKEKHARRIILGTHHEKGAFTFWSYAIGLPLPSSSILSWKFCHVLHKVLRDGHPNVL
HDCQRYRSNIREIGDLWGHLHDRYGQLVNVYTKLLLTKISFHLKHPQFPAGLEVTDEV
LEKAAGTDVNNIFQLTVEMFDYMDCELKLSESVFRQLNTAIAVSQMSSGQCRLAPLIQ
VIQDCSHLYHYTVKLLFKLHSCLPADTLQGHRDRFHEQFHSLRNFFRRASDMLYFKRL
IQIPRLPEGPPNFLRASALAEHIKPVVVIPEEAPEDEEPENLIEISTGPPAGEPVVVA
DLFDQTFGPPSGSVKDDRDLQIESLKREVEMLRSELEKIKLEAQRYIAQLKSQVNALE
GELEEQRKQKQKALVDNEQLRHELAQLRAAQLEGERSQGLREEAERKASATEARYNKL
KEKHSELVHVHAELLRKNADTAKQLTVTQQSQEEVARVKEQLAFQVEQVKRESELKLE
EKSDQLEKLKRELEAKAGELARAQEALSHTEQSKSELSSRLDTLSAEKDALSGAVRQR
EADLLAAQSLVRETEAALSREQQRSSQEQGELQGRLAERVWPPQMQQHH"
BASE COUNT 466 a 578 c 658 g 307 t
ORIGIN
1 ccggaccgtg aggctgtgag tcgcgcggac ggagccggac aaaagcgggc ggcggcggca
61 ggatgaacag catcaagaac gtgccggcgc gggtgctgag ccgcaggccg ggccacagcc
121 tggaggccga gcgcgagcag ttcgacaaga cccaggccat cagcatcagc aaagccatca
181 acacccagga ggcccccgtg aaggagaagc acgcccggcg catcattctg ggcacacacc
241 acgagaaggg ggctttcacc ttctggtcct atgccattgg gctgccgctg cccagcagct
301 ccattctcag ctggaagttc tgccacgtcc tccacaaggt ccttcgagac gggcacccca
361 atgtgctgca tgactgccag cggtaccgca gcaacatccg ggagattgga gacctgtggg
421 gacatttgca tgaccgctac ggacagctgg tgaatgtcta caccaagctg ctgctgacca
481 agatctcctt ccacctcaag catccccagt ttcccgcggg cctggaggtg acagatgagg
541 tactggagaa ggcagctggg accgatgtca acaacatctt ccagctcact gtggagatgt
601 ttgattacat ggattgtgag ctgaagcttt ctgaatcagt tttccgacag ctcaacacgg
661 ccatcgccgt atcccagatg tcctcaggcc agtgccgcct ggcccccctc atccaggtca
721 tccaggactg cagccacctc taccactaca cggtcaagct cctgttcaag ctacactctt
781 gtctccctgc ggacaccctg caaggccaca gggaccggtt ccacgagcag tttcacagcc
841 tcaggaactt cttccgcaga gcctccgaca tgctgtactt caagcggctc atccagatcc
901 cccggctgcc cgagggaccc cctaacttcc tgcgggcctc agccctggct gagcacatca
961 agccggtggt ggtgatcccc gaggaggccc cggaagatga ggagccggag aatctcattg
1021 agatcagcac agggcccccc gcgggggagc cagtggtggt ggctgacctc ttcgatcaga
1081 cgtttggacc ccccagtggg tctgtgaagg acgacaggga cctccagatt gagagcttga
1141 agagagaggt ggaaatgctc cgctctgaac tggagaagat caagctggag gcccagcggt
1201 acatcgcgca gctgaagagc caggtgaatg cactggaggg tgagctggag gagcagcgga
1261 agcagaagca gaaggccctg gtggataatg agcagctccg ccacgagctg gcccagctga
1321 gggctgccca gctggagggc gagcggagcc agggcctgcg tgaggaggct gagaggaagg
1381 ccagtgccac ggaggcgcgc tacaacaagc tgaaggaaaa gcacagtgag ctcgtccatg
1441 tgcacgcgga gctgctcaga aagaacgcgg acacagccaa gcagctgacg gtgacgcagc
1501 aaagccagga ggaggtggcg cgggtgaagg agcagctggc cttccaggtg gagcaggtga
1561 agcgggagtc ggagttgaag ctagaggaga agagcgacca gctggagaag ctcaagaggg
1621 agctggaggc caaggccgga gagctggccc gcgcgcagga ggccctgagc cacacagagc
1681 agagcaagtc ggagctgagc tcacggctgg acacgctgag tgcggagaag gatgctctga
1741 gtggagctgt gcggcagcgg gaggcagacc tgctggcggc gcagagcctg gtgcgcgaga
1801 cagaggcggc gctgagccgg gagcagcagc gcagctccca ggagcagggc gagttgcagg
1861 gccggctggc agagagggta tggcctcccc agatgcagca gcaccactga gttcactgcc
1921 gtctggcaac catcgatctg tctccgtcat ctgcctgttc tagagatttc atgtaaacgg
1981 gatcatacac gaaaaaaaaa aaaaaaaaa
//