LOCUS BC067082 2246 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens heat shock 60kDa protein 1 (chaperonin), mRNA (cDNA
clone MGC:71259 IMAGE:4025725), complete cds.
ACCESSION BC067082
VERSION BC067082.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2246)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2246)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: c Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41399283.
FEATURES Location/Qualifiers
source 1..2246
/db_xref="H-InvDB:HIT000262417"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71259 IMAGE:4025725"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2246
/gene="HSPD1"
/gene_synonym="CPN60"
/gene_synonym="GROEL"
/gene_synonym="HSP60"
/gene_synonym="HSP65"
/gene_synonym="HuCHA60"
/db_xref="GeneID:3329"
/db_xref="HGNC:HGNC:5261"
/db_xref="MIM:118190"
CDS 46..1767
/gene="HSPD1"
/gene_synonym="CPN60"
/gene_synonym="GROEL"
/gene_synonym="HSP60"
/gene_synonym="HSP65"
/gene_synonym="HuCHA60"
/codon_start=1
/product="heat shock 60kDa protein 1 (chaperonin)"
/protein_id="AAH67082.1"
/db_xref="GeneID:3329"
/db_xref="HGNC:HGNC:5261"
/db_xref="MIM:118190"
/translation="MLRLPTVFRQMRPVSRVLAPHLTRAYAKDVKFGADARALMLQGV
DLLADAVAVTMGPKGRTVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVA
NNTNEEAGDGTTTATVLARSIAKEGFEKISKGANPVEIRRGVMLAVDAVIAELKKQSK
PVTTPEEIAQVATISANGDKEIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMK
FDRGYISPYFINTSKGQKCEFQDAYVLLSEKKISSIQSIVPALEIANAHRKPLVIIAE
DVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQLKDMAIATGGAVFGEEGLTLNL
EDVQPHDLGKVGEVIVTKDDAMLLKGKGDKAQIEKRIQEIIEQLDVTTSEYEKEKLNE
RLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVEEGIVLGGGCALLRCIPA
LDSLTPANEDQKIGIEIIKRTLKIPAMTIAKNAGVEGSLIVEKIMQSSSEVGYDAMAG
DFVNMVEKGIIDPTKVVRTALLDAAGVASLLTTAEVVVTEIPKEEKDPGMGAMGGMGG
GMGGGMF"
BASE COUNT 723 a 380 c 544 g 599 t
ORIGIN
1 acgacctgtc tcgccgagcg cacgccttgc tgccgccccg cagaaatgct tcggttaccc
61 acagtctttc gccagatgag accggtgtcc agggtactgg ctcctcatct cacccgggct
121 tatgccaaag atgtaaaatt tggtgcagat gcccgagcct taatgcttca aggtgtagac
181 cttttagccg atgctgtggc cgttacaatg gggccaaagg gaagaacagt gattattgag
241 cagagttggg gaagtcccaa agtaacaaaa gatggtgtga ctgttgcaaa gtcaattgac
301 ttaaaagata aatacaagaa cattggagct aaacttgttc aagatgttgc caataacaca
361 aatgaagaag ctggggatgg cactaccact gctactgtac tggcacgctc tatagccaag
421 gaaggcttcg agaagattag caaaggtgct aatccagtgg aaatcaggag aggtgtgatg
481 ttagctgttg atgctgtaat tgctgaactt aaaaagcagt ctaaacctgt gaccacccct
541 gaagaaattg cacaggttgc tacgatttct gcaaacggag acaaagaaat tggcaatatc
601 atctctgatg caatgaaaaa agttggaaga aagggtgtca tcacagtaaa ggatggaaaa
661 acactgaatg atgaattaga aattattgaa ggcatgaagt ttgatcgagg ctatatttct
721 ccatacttta ttaatacatc aaaaggtcag aaatgtgaat tccaggatgc ctatgttctg
781 ttgagtgaaa agaaaatttc tagtatccag tccattgtac ctgctcttga aattgccaat
841 gctcaccgta agcctttggt cataatcgct gaagatgttg atggagaagc tctaagtaca
901 ctcgtcttga ataggctaaa ggttggtctt caggttgtgg cagtcaaggc tccagggttt
961 ggtgacaata gaaagaacca gcttaaagat atggctattg ctactggtgg tgcagtgttt
1021 ggagaagagg gattgaccct gaatcttgaa gacgttcagc ctcatgactt aggaaaagtt
1081 ggagaggtca ttgtgaccaa agacgatgcc atgctcttaa aaggaaaagg tgacaaggct
1141 caaattgaaa aacgtattca agaaatcatt gagcagttag atgtcacaac tagtgaatat
1201 gaaaaggaaa aactgaatga acggcttgca aaactttcag atggagtggc tgtgctgaag
1261 gttggtggga caagtgatgt tgaagtgaat gaaaagaaag acagagttac agatgccctt
1321 aatgctacaa gagctgctgt tgaagaaggc attgttttgg gagggggttg tgccctcctt
1381 cgatgcattc cagccttgga ctcattgact ccagctaatg aagatcaaaa aattggtata
1441 gaaattatta aaagaacact caaaattcca gcaatgacca ttgctaagaa tgcaggtgtt
1501 gaaggatctt tgatagttga gaaaattatg caaagttcct cagaagttgg ttatgatgct
1561 atggctggag attttgtgaa tatggtggaa aaaggaatca ttgacccaac aaaggttgtg
1621 agaactgctt tattggatgc tgctggtgtg gcctctctgt taactacagc agaagttgta
1681 gtcacagaaa ttcctaaaga agagaaggac cctggaatgg gtgcaatggg tggaatggga
1741 ggtggtatgg gaggtggcat gttctaactc ctagactagt gctttacctt tattaatgaa
1801 ctgtgacagg aagcccaagg cagtgttcct caccaataac ttcagagaag tcagttggag
1861 aaaatgaaga aaaaggctgg ctgaaaatca ctataaccat cagttactgg tttcagttga
1921 caaaatatat aatggtttac tgctgtcatt gtccatgcct acagataatt tattttgtat
1981 ttttgaataa aaaacatttg tacattcctg atactgggta caagagccat gtaccagtgt
2041 actgctttca acttaaatca ctgaggcatt tttactacta ttctgttaaa atcaggattt
2101 tagtgcttgc caccaccaga tgagaagtta agcagccttt ctgtggagag tgagaataat
2161 tgtgtacaaa gtagagaagt atccaattat gtgacaacct ttgtgtaata aaaatttgtt
2221 taaagttaaa aaaaaaaaaa aaaaaa
//