LOCUS BC066932 1728 bp mRNA linear HUM 07-NOV-2006
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2),
mRNA (cDNA clone MGC:87239 IMAGE:4375450), complete cds.
ACCESSION BC066932
VERSION BC066932.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1728)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1728)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: b Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14110430.
FEATURES Location/Qualifiers
source 1..1728
/db_xref="H-InvDB:HIT000262353"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87239 IMAGE:4375450"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1728
/gene="HNRPC"
/gene_synonym="C1"
/gene_synonym="C2"
/gene_synonym="HNRNP"
/gene_synonym="hnRNPC"
/gene_synonym="SNRPC"
/db_xref="GeneID:3183"
/db_xref="HGNC:HGNC:5035"
/db_xref="MIM:164020"
CDS 164..1045
/gene="HNRPC"
/gene_synonym="C1"
/gene_synonym="C2"
/gene_synonym="HNRNP"
/gene_synonym="hnRNPC"
/gene_synonym="SNRPC"
/codon_start=1
/product="heterogeneous nuclear ribonucleoprotein C
(C1/C2)"
/protein_id="AAH66932.1"
/db_xref="GeneID:3183"
/db_xref="HGNC:HGNC:5035"
/db_xref="MIM:164020"
/translation="MASNVTNKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIV
GCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAA
EMYGSSFDLDYDFQRDYYDRMYSYPARVPPPPPIARAVVPSKRQRVSGNTSRRGKSGF
NSKSGQRGSSKSGKLKGDDLQAIKKELTQIKQKVDSLLENLEKIEKEQSKQAVEMKND
KSEEEQSSSSVKKDETNVKMESEGGADDSAEEGDLLDDDDNEDRGDDQLELIKDDEKE
AEEGEDDRDSANGEDDS"
BASE COUNT 494 a 343 c 412 g 479 t
ORIGIN
1 agtttgtgaa gagacgaaga ctgagcggtt gtggccgcgt tgccgacctc cagcagcagt
61 cggcttctct acgcagaacc cgggagtagg agactcagaa tcgaatctct tctccctccc
121 cttcttgttt tcggctttgt gagaaacctt accatcaaac acgatggcca gcaacgttac
181 caacaagaca gatcctcgct ccatgaactc ccgtgtattc attgggaatc tcaacactct
241 tgtggtcaag aaatctgatg tggaggcaat cttttcgaag tatggcaaaa ttgtgggctg
301 ctctgttcat aagggctttg ccttcgttca gtatgttaat gagagaaatg cccgggctgc
361 tgtagcagga gaggatggca gaatgattgc tggccaggtt ttagatatta acctggctgc
421 agagccaaaa gtgaaccgag gaaaagcagg tgtgaaacga tctgcagcgg agatgtacgg
481 ctcctctttt gacttggact atgactttca acgggactat tatgatagga tgtacagtta
541 cccagcacgt gtacctcctc ctcctcctat tgctcgggct gtagtgccct cgaaacgtca
601 gcgtgtatca ggaaacactt cacgaagggg caaaagtggc ttcaattcta agagtggaca
661 gcggggatct tccaagtctg gaaagttgaa aggagatgac cttcaggcca ttaagaagga
721 gctgacccag ataaaacaaa aagtggattc tctcctggaa aacctggaaa aaattgaaaa
781 ggaacagagc aaacaagcag tagagatgaa gaatgataag tcagaagagg agcagagcag
841 cagctccgtg aagaaagatg agactaatgt gaagatggag tctgaggggg gtgcagatga
901 ctctgctgag gagggggacc tactggatga tgatgataat gaagatcggg gggatgacca
961 gctggagttg atcaaggatg atgaaaaaga ggctgaggaa ggagaggatg acagagacag
1021 cgccaatggc gaggatgact cttaagcaca tagtggggtt tagaaatctt atcccattat
1081 ttctttacct aggcgcttgt ctaagatcaa atttttcacc agatcctctc ccctagtatc
1141 ttcagcacat gctcactgtt ctccccatcc ttgtccttcc catgttcatt aattcatatt
1201 gccccgcgcc tagtcccatt ttcacttcct ttgacgctcc tagtagtttt gttaagtctt
1261 accctgtaat ttttgctttt aattttgata cctctttatg acttaacaat aaaaaggatg
1321 tatggttttt atcaactgtc tccaaaataa tctcttgtta tgcagggagt acagttcttt
1381 tcattcatac ataagttcag tagttgcttc cctaactgca aaggcaatct catttagttg
1441 agtagctctt gaaagcagct ttgagttaga agtatgtgtg ttacaccctc acattagtgt
1501 gctgtgtggg gcagttcaac acaaatgtaa caatgtattt ttgtgaatga gagttggcat
1561 gtcaaatgca tcctctagaa aaataattag tgttatagtc ttaagatttg ttttctaaag
1621 ttgatactgt gggttatttt tgtgaacagc ctgatgtttg ggaccttttt tcctcaaaat
1681 aaacaagtcc ttattaaacc aggaatttgg agaaaaaaaa aaaaaaaa
//