LOCUS BC066927 1706 bp mRNA linear HUM 05-MAR-2004
DEFINITION Homo sapiens G protein-coupled receptor 18, mRNA (cDNA clone
MGC:87213 IMAGE:4373724), complete cds.
ACCESSION BC066927
VERSION BC066927.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1706)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1706)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: a Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 15029527.
FEATURES Location/Qualifiers
source 1..1706
/db_xref="H-InvDB:HIT000262348"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87213 IMAGE:4373724"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescript"
gene 1..1706
/gene="GPR18"
/db_xref="GeneID:2841"
/db_xref="MIM:602042"
CDS 558..1553
/gene="GPR18"
/codon_start=1
/product="GPR18 protein"
/protein_id="AAH66927.1"
/db_xref="GeneID:2841"
/db_xref="MIM:602042"
/translation="MITLNNQDQPVPFNSSHPDEYKIAALVFYSCIFIIGLFVNITAL
WVFSCTTKKRTTVTIYMMNVALVDLIFIMTLPFRMFYYAKDEWPFGEYFCQILGALTV
FYPSIALWLLAFISADRYMAIVQPKYAKELKNTCKAVLACVGVWIMTLTTTTPLLLLY
KDPDKDSTPATCLKISDIIYLKAVNVLNLTRLTFFFLIPLFIMIGCYLVIIHNLLHGR
TSKLKPKVKEKSIRIIITLLVQVLVCFMPFHICFAFLMLGTGENSYNPWGAFTTFLMN
LSTCLDVILYYIVSKQFQARVISVMLYRNYLRSMRRKSFRSGSLRSLSNINSEML"
misc_feature 675..1415
/gene="GPR18"
/note="7tm_1; Region: 7 transmembrane receptor (rhodopsin
family)"
/db_xref="CDD:pfam00001"
BASE COUNT 532 a 384 c 302 g 488 t
ORIGIN
1 agtaaaatgt cacactgcaa actctgggcc tggggtccca tgggacttca gtggttccag
61 gactgatttc actgccatca cttatatatg atgatgcaga cttcaagcat caaagtacac
121 aaactgaaga aactttatcc tttgtatata attatcttaa atatatgcca tcatttcaag
181 gggagcttat gctaagtgtg acttcataaa caaatcattt gtgaaagaga aaaaccacat
241 ccagggtaaa gtcataaggt gaaaaagcct atttcagaga gcacttcctg aaagagacaa
301 agcagcaatt aaagtcagcc cagcaccaac tccgacgcca agcgttacac tggaaactac
361 tttttaaagc aacaaaagag tctaaaacaa aatacaacat ttcttaaata cactgtttcc
421 agaaagagct attttaacag aagcaactca aagatatccc ttcgacagaa gtggaagtgc
481 tgaaaaatgc tcatccctca cacagacttt tgatggacag gagtttctaa gtatcatgcc
541 taccaacaag ctgtaaaatg atcaccctga acaatcaaga tcaacctgtc ccttttaaca
601 gctcacatcc agatgaatac aaaattgcag cccttgtctt ctatagctgt atcttcataa
661 ttggattatt tgttaacatc actgcattat gggttttcag ttgtaccacc aagaagagaa
721 ccacggtaac catctatatg atgaatgtgg cattagtgga cttgatattt ataatgactt
781 taccctttcg aatgttttat tatgcaaaag atgaatggcc atttggagag tacttctgcc
841 agattcttgg agctctcaca gtgttttacc caagcattgc tttatggctt cttgccttta
901 ttagtgctga cagatacatg gccattgtac agccgaagta cgccaaagaa cttaaaaaca
961 cgtgcaaagc cgtgctggcg tgtgtgggag tctggataat gaccctgacc acgaccaccc
1021 ctctgctact gctctataaa gacccagata aagactccac tcccgccacc tgcctcaaga
1081 tttctgacat catctatcta aaagctgtga acgtgctgaa cctcactcga ctgacatttt
1141 ttttcttgat tcctttgttc atcatgattg ggtgctactt ggtcattatt cataatctcc
1201 ttcacggcag gacgtctaag ctgaaaccca aagtcaagga gaagtccata aggatcatca
1261 tcacgctgct ggtgcaggtg ctcgtctgct ttatgccctt ccacatctgt ttcgctttcc
1321 tgatgctggg aacgggggag aacagttaca atccctgggg agcctttacc accttcctca
1381 tgaacctcag cacgtgtctg gatgtgattc tctactacat cgtttcaaaa caatttcagg
1441 ctcgagtcat tagtgtcatg ctataccgta attaccttcg aagcatgcgc agaaaaagtt
1501 tccgatctgg tagtctacgg tcactaagca atataaacag tgaaatgtta tgaataataa
1561 ggttctttca tttcaatccc atcaaaattc acttcactaa ctactctggc gtcaatggat
1621 attctgtata atactatcaa gtcccttttc tcttgaaaaa ataaattcat tatcttcatt
1681 ttaaaaactt aaaaaaaaaa aaaaaa
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