LOCUS BC066904 1375 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens RAB34, member RAS oncogene family, mRNA (cDNA clone
MGC:87058 IMAGE:5260472), complete cds.
ACCESSION BC066904
VERSION BC066904.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1375)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1375)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: i Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543536.
FEATURES Location/Qualifiers
source 1..1375
/db_xref="H-InvDB:HIT000262325"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87058 IMAGE:5260472"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1375
/gene="RAB34"
/gene_synonym="RAB39"
/gene_synonym="RAH"
/db_xref="GeneID:83871"
CDS 222..1001
/gene="RAB34"
/gene_synonym="RAB39"
/gene_synonym="RAH"
/codon_start=1
/product="RAB34 protein"
/protein_id="AAH66904.1"
/db_xref="GeneID:83871"
/translation="MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHR
TGTVGFKISKVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFS
LQLWDTAGQERFKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVL
LFLVGSKKDLSTPAQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFE
ANVLAELEKSGARRIGDVVRINSDDNNLYLTASKKKPTCCP"
BASE COUNT 294 a 382 c 392 g 307 t
ORIGIN
1 ggtttctggc atcgccagat gctgcgcagc agtctccgat tccccatcac caattcggct
61 ggcgtctccg agaccgcgga ctcccgtagg gtccccgtgg caccgagttg tagtcgggac
121 accccggccg cgggtgatcg tcgggtctcc acgcgcccgg gtcgctgacg cggatccggc
181 ctcggcgcct tctcagggcg ccctgcaagg ccgcaggcag gatgaacatt ctggcacccg
241 tgcggaggga tcgcgtcctg gcggagctgc cccagtgcct gaggaaggag gccgctttgc
301 acgggcacaa agacttccac ccccgcgtca cctgcgcctg ccaggagcac cggacaggca
361 ccgtgggatt taagatctcc aaggtcattg tggtggggga cctgtcggtg gggaagactt
421 gcctcattaa taggttctgc aaagacacct ttgataagaa ttacaaggcc accattggag
481 tggacttcga gatggaacga tttgaggtgc tgggcattcc cttcagtttg cagctttggg
541 ataccgctgg gcaggagagg ttcaaatgca ttgcatcaac ctactataga ggagctcaag
601 ccatcatcat tgtcttcaac ctgaatgatg tggcatctct ggaacatacc aagcagtggc
661 tggccgatgc cctgaaggag aatgaccctt ccagtgtgct tctcttcctt gtaggttcca
721 agaaggatct gagtacccct gctcagtatg cgctgatgga gaaagacgcc ctccaggtgg
781 cccaggagat gaaggctgag tactgggcag tctcatctct cactggtgag aatgtccgag
841 aattcttctt ccgtgtggca gcactgacct ttgaggccaa tgtgctggct gagctggaga
901 aatcgggggc tcgacgcatt ggggatgttg tccgcatcaa cagtgatgac aacaacctct
961 acctaactgc cagcaagaag aagcccacat gttgcccatg agggctgagg agactgttca
1021 gagactgccc agccctaggg cactgtgcca ccctcattcc tccagagctt gacccctgga
1081 catttgcact gactttatcc agaccaaaga gctgcctctt ggtggcagta ttcccacaga
1141 ggggtagctg ggatcatgct agtcacttcc tgcccccagg caccgtgcca aagactggat
1201 gccccctact cctcagggga ctgtccaggg cgcccagtgg tagtgaggga gagtgtctct
1261 gttcttttgc tcagcctgct gggccctttg tgtttgagga tgcttaatga ttccagcctc
1321 tcactgtgca ttatgcatta aaatttcttt gttacgagca aaaaaaaaaa aaaaa
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