LOCUS BC066896 1324 bp mRNA linear HUM 25-JUL-2007
DEFINITION Homo sapiens kelch domain containing 9, mRNA (cDNA clone MGC:86989
IMAGE:4828667), complete cds.
ACCESSION BC066896
VERSION BC066896.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1324)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1324)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: h Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55956889.
FEATURES Location/Qualifiers
source 1..1324
/db_xref="H-InvDB:HIT000262317"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:86989 IMAGE:4828667"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1324
/gene="KLHDC9"
/gene_synonym="KARCA1"
/gene_synonym="RP11-544M22.9"
/db_xref="GeneID:126823"
/db_xref="HGNC:HGNC:28489"
CDS 140..1189
/gene="KLHDC9"
/gene_synonym="KARCA1"
/gene_synonym="RP11-544M22.9"
/codon_start=1
/product="kelch domain containing 9"
/protein_id="AAH66896.1"
/db_xref="GeneID:126823"
/db_xref="HGNC:HGNC:28489"
/translation="MAVAVPPGRAAGSGWAWRPVARDALLARAFHSCTELRGRFYLVG
GLLAGGAREPSSDTVVFDPARGQAVRLGARGSPPRSHHDAAPVDGRWLCVVGGWDGSR
RLATVTALDTERGVWEAWTGTPGDCPPAGLSSHTCTRISDRELQVAGREGGIHTQRRY
GSIYTLRLDPSARTYCYKQEGCHTASRSGHCAALLQTPGPHPGHQLLLFGGCNLAEPE
VAGHWSHGKIKEEPPVAPHLMEQLARLVSSGQGSQKGPHGLRHHSCSVVGPFAVLFGG
ETLTRTRDTICNDLYIYDTRTSPPLWFHFPCADRGMKRMGHRTCLWNDQLYLVGGFGE
DGRTASPQVCILDFI"
BASE COUNT 267 a 381 c 400 g 276 t
ORIGIN
1 gacttgaggt gggaaccccg gctggcgtcc ggtaggggga ggttcccggg gaagcccgcg
61 gaaggcgagg tgcctggcct gccatgtagg ggctcgttcc aagccgcaga ccccaccgcc
121 ctccctctcc ccggggccca tggcggtggc cgtgcccccg ggtcgggccg caggctcagg
181 ctgggcctgg aggccagtgg cgcgggacgc gcttttggct agagctttcc attcatgcac
241 cgaactgcgg ggacggttct atctcgtagg tggtctccta gcaggaggag cgagagagcc
301 cagcagcgat acggtggttt tcgacccagc taggggccag gccgtacgat tgggagcccg
361 gggcagcccc ccgcgcagtc accacgacgc ggcacccgtg gacgggcgtt ggctctgcgt
421 ggtgggcggc tgggacgggt ctcgccgctt ggccacagtg accgcactgg acacagagcg
481 cggtgtgtgg gaggcgtgga cagggacccc tggtgactgc ccccccgccg gcctcagtag
541 tcacacctgc acccgaatct ctgaccgaga gctgcaggtg gctggccggg agggcggtat
601 ccacactcag cgacgctatg gaagcatcta cacattaagg ctggacccca gcgcccgcac
661 ctattgctac aagcaagaag gctgccacac agcctcacgc tcaggtcact gtgcggccct
721 gctccaaact cctggacccc atccaggtca tcagctattg ctctttggag gttgcaactt
781 agctgaacca gaagtagctg ggcattggag tcatgggaaa attaaggagg aaccacctgt
841 tgctcctcat ttgatggaac agcttgcaag gcttgtgagc agtgggcagg ggtcccagaa
901 ggggccccat ggactacggc atcactcatg ttctgtggtc gggccctttg ctgtgctgtt
961 tggtggagaa actctgacca gaactagaga caccatctgc aatgatctct acatctatga
1021 tactcgcaca tctcctcctt tgtggttcca cttcccctgt gcagatcgtg ggatgaaacg
1081 catgggccat cgcacctgcc tttggaatga tcagctttac ctggttgggg gttttggtga
1141 ggatggcagg acagccagtc cacaggtttg catcctggac tttatctaaa tagtgccaag
1201 acacatcact aagcctcgtt ttgttttgct ttgttgcaaa cctataaagc gttatcacca
1261 gagctatctg cttcacttca aatgcttatt aaatttcaat ctgagactca aaaaaaaaaa
1321 aaaa
//