LOCUS BC066890 2129 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens nuclear receptor subfamily 4, group A, member 2, mRNA
(cDNA clone MGC:86960 IMAGE:4828460), complete cds.
ACCESSION BC066890
VERSION BC066890.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2129)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2129)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: h Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27894352.
FEATURES Location/Qualifiers
source 1..2129
/db_xref="H-InvDB:HIT000262311"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:86960 IMAGE:4828460"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2129
/gene="NR4A2"
/gene_synonym="HZF-3"
/gene_synonym="NOT"
/gene_synonym="RNR1"
/gene_synonym="TINUR"
/db_xref="GeneID:4929"
/db_xref="HGNC:HGNC:7981"
/db_xref="MIM:601828"
CDS 343..1950
/gene="NR4A2"
/gene_synonym="HZF-3"
/gene_synonym="NOT"
/gene_synonym="RNR1"
/gene_synonym="TINUR"
/codon_start=1
/product="nuclear receptor subfamily 4, group A, member 2"
/protein_id="AAH66890.1"
/db_xref="GeneID:4929"
/db_xref="HGNC:HGNC:7981"
/db_xref="MIM:601828"
/translation="MDNYSTGYDVKPPCLYQMPLSGQQSSIKVEDIQMHNYQQHSHLP
PQSEEMMPHSGSVYYKPSSPPTPTTPGFQVQHSPMWDDPGSLHNFHQNYVATTHMIEQ
RKTPVSRLSLFSFKQSPPGTPVSSCQMRFDGPLHVPMNPEPAGSHHVVDGQTFAVPNP
IRKPASMGFPGLQIGHASQLLDTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCE
GCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLK
GRRGRLPSKPKSPQEPSPPSPPVSLISALVRAHVDSNPAMTSLDYSRFQANPDYQMSG
DDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRS
NPVEGKLIFCNGVVLHRLQCVRGFGEWIDSIVEFSSNLQNMNIDISAFSCIAALAMVT
ERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPNYLSKLLGKLPELRTLCTQGLQ
RIFYLKLEDLVPPPAIIDKLFLDTLPF"
BASE COUNT 501 a 666 c 516 g 446 t
ORIGIN
1 agtccgcccg gcggctcgcg cacggctccg cggtcccttt tgcctgtcca gccggccgcc
61 tgtccctgct ccctccctcc gtgaggtgtc cgggttccct tcgcccagct ctcccacccc
121 tacccgaccc cggcgcccgg gctcccagag ggaactgcac ttcggcagag ttgaatgaat
181 gaagagagac gcggagaact cctaaggagg agattggaca ggctggactc cccattgctt
241 ttctaaaaat cttggaaact ttgtccttca ttgaattacg acactgtcca cctttaattt
301 cctcgaaaac gcctgtaact cggctgaagc ttcagtacct ttatggacaa ctacagcaca
361 ggctacgacg tcaagccacc ttgcttgtac caaatgcccc tgtccggaca gcagtcctcc
421 attaaggtag aagacattca gatgcacaac taccagcaac acagccacct gcccccccag
481 tctgaggaga tgatgccgca ctccgggtcg gtttactaca agccctcctc gcccccgacg
541 cccaccaccc cgggcttcca ggtgcagcac agccccatgt gggacgaccc gggatctctc
601 cacaacttcc accagaacta cgtggccact acgcacatga tcgagcagag gaaaacgcca
661 gtctcccgcc tctccctctt ctcctttaag caatcgcccc ctggcacccc ggtgtctagt
721 tgccagatgc gcttcgacgg gcccctgcac gtccccatga acccggagcc cgccggcagc
781 caccacgtgg tggacgggca gaccttcgct gtgcccaacc ccattcgcaa gcccgcgtcc
841 atgggcttcc cgggcctgca gatcggccac gcgtctcagc tgctcgacac gcaggtgccc
901 tcaccgccgt cgcggggctc cccctccaac gaggggctgt gcgctgtgtg tggggacaac
961 gcggcctgcc aacactacgg cgtgcgcacc tgtgagggct gcaaaggctt ctttaagcgc
1021 acagtgcaaa aaaatgcaaa atacgtgtgt ttagcaaata aaaactgccc agtggacaag
1081 cgtcgccgga atcgctgtca gtactgccga tttcagaagt gcctggctgt tgggatggtc
1141 aaagaagtgg ttcgcacaga cagtttaaaa ggccggagag gtcgtttgcc ctcgaaaccg
1201 aagagcccac aggagccctc tcccccttcg cccccggtga gtctgatcag tgccctcgtc
1261 agggcccatg tcgactccaa cccggctatg accagcctgg actattccag gttccaggcg
1321 aaccctgact atcaaatgag tggagatgac acccagcata tccagcaatt ctatgatctc
1381 ctgactggct ccatggagat catccggggc tgggcagaga agatccctgg cttcgcagac
1441 ctgcccaaag ccgaccaaga cctgcttttt gaatcagctt tcttagaact gtttgtcctt
1501 cgattagcat acaggtccaa cccagtggag ggtaaactca tcttttgcaa tggggtggtc
1561 ttgcacaggt tgcaatgcgt tcgtggcttt ggggaatgga ttgattccat tgttgaattc
1621 tcctccaact tgcagaatat gaacatcgac atttctgcct tctcctgcat tgctgccctg
1681 gctatggtca cagagagaca cgggctcaag gaacccaaga gagtggaaga actgcaaaac
1741 aagattgtaa attgtctcaa agaccacgtg actttcaaca atggggggtt gaaccgcccc
1801 aattatttgt ccaaactgtt ggggaagctc ccagaacttc gtaccctttg cacacagggg
1861 ctacagcgca ttttctacct gaaattggaa gacttggtgc caccgccagc aataattgac
1921 aaacttttcc tggacacttt acctttctaa gacctcctcc caagcacttc aaaggaactg
1981 gaatgataat ggaaactgtc aagagggggc aagtcacatg ggcagagata gccgtgtgag
2041 cagtctcagc tcaagctgcc ccccatttct gtaaccctcc tagccccctt gatccctaaa
2101 gaaaacaaac aaacaaaaaa aaaaaaaaa
//