LOCUS BC066306 1215 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens SMT3 suppressor of mif two 3 homolog 1 (S.
cerevisiae), mRNA (cDNA clone MGC:87116 IMAGE:4818792), complete
cds.
ACCESSION BC066306
VERSION BC066306.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1215)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1215)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-FEB-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: e Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54792063.
FEATURES Location/Qualifiers
source 1..1215
/db_xref="H-InvDB:HIT000262197"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87116 IMAGE:4818792"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1215
/gene="SUMO1"
/gene_synonym="GMP1"
/gene_synonym="PIC1"
/gene_synonym="SENP2"
/gene_synonym="SMT3"
/gene_synonym="SMT3C"
/gene_synonym="SMT3H3"
/gene_synonym="SUMO-1"
/db_xref="GeneID:7341"
/db_xref="HGNC:HGNC:12502"
/db_xref="MIM:601912"
CDS 125..430
/gene="SUMO1"
/gene_synonym="GMP1"
/gene_synonym="PIC1"
/gene_synonym="SENP2"
/gene_synonym="SMT3"
/gene_synonym="SMT3C"
/gene_synonym="SMT3H3"
/gene_synonym="SUMO-1"
/codon_start=1
/product="SMT3 suppressor of mif two 3 homolog 1 (S.
cerevisiae)"
/protein_id="AAH66306.1"
/db_xref="GeneID:7341"
/db_xref="HGNC:HGNC:12502"
/db_xref="MIM:601912"
/translation="MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHL
KKLKESYCQRQGVPMNSLRFLFEGQRIADNNTPKELGMEEEDVIEVYQEQTGGHSTV"
BASE COUNT 382 a 206 c 256 g 371 t
ORIGIN
1 gaagttactg cagccgcggt gttgtgctgt ggggaaggga gaaggatttg taaaccccgg
61 agcgaggttc tgcttacccg aggccgctgc tgtgcggaga cccccgggtg aagccaccgt
121 catcatgtct gaccaggagg caaaaccttc aactgaggac ttgggggata agaaggaagg
181 tgaatatatt aaactcaaag tcattggaca ggatagcagt gagattcact tcaaagtgaa
241 aatgacaaca catctcaaga aactcaaaga atcatactgt caaagacagg gtgttccaat
301 gaattcactc aggtttctct ttgagggtca gagaattgct gataataata ctccaaaaga
361 actgggaatg gaggaagaag atgtgattga agtttatcag gaacaaacgg ggggtcattc
421 aacagtttag atattctttt tatttttttt cttttccctc aatccttttt tatttttaaa
481 aatagttctt ttgtaatgtg gtgttcaaaa cggaattgaa aactggcacc ccatctcttt
541 gaaacatctg gtaatttgaa ttctagtgct cattattcat tattgtttgt tttcattgtg
601 ctgatttttg gtgatcaagc ctcagtcccc ttcatattac cctctccttt ttaaaaatta
661 cgtgtgcaca gagaggtcac ctttttcagg acattgcatt ttcaggcttg tggtgataaa
721 taagatcgac caatgcaagt gttcataatg actttccaat tggccctgat gttctagcat
781 gtgattactt cactcctgga ctgtgacttt cagtgggaga tggaagtttt tcagagaact
841 gaactgtgga aaaatgacct ttccttaact tgaagctact tttaaaattt gagggtctgg
901 accaaaagaa gaggaatatc aggttgaagt caagatgaca gataaggtga gagtaatgac
961 taactccaaa gatggcttca ctgaagaaaa ggcattttaa gattttttaa aaatcttgtc
1021 agaagatccc agaaaagttc taattttcat tagcaattaa taaagctata catgcagaaa
1081 tgaatacaac agaacactgc tctttttgat tttatttgta ctttttggcc tgggatatgg
1141 gttttaaatg gacattgtct gtaccagctt cattaaaata aacaatattt gtaaaaacca
1201 aaaaaaaaaa aaaaa
//