LOCUS BC066304 621 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens lectin, galactoside-binding, soluble, 13, mRNA (cDNA
clone MGC:87096 IMAGE:30332308), complete cds.
ACCESSION BC066304
VERSION BC066304.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 621)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 621)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-FEB-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: i Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20302163.
FEATURES Location/Qualifiers
source 1..621
/db_xref="H-InvDB:HIT000262195"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87096 IMAGE:30332308"
/tissue_type="Placenta, pre-eclamptic"
/clone_lib="NIH_MGC_148"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..621
/gene="LGALS13"
/gene_synonym="GAL13"
/gene_synonym="PLAC8"
/gene_synonym="PP13"
/db_xref="GeneID:29124"
/db_xref="HGNC:HGNC:15449"
/db_xref="MIM:608717"
CDS 46..465
/gene="LGALS13"
/gene_synonym="GAL13"
/gene_synonym="PLAC8"
/gene_synonym="PP13"
/codon_start=1
/product="lectin, galactoside-binding, soluble, 13"
/protein_id="AAH66304.1"
/db_xref="GeneID:29124"
/db_xref="HGNC:HGNC:15449"
/db_xref="MIM:608717"
/translation="MSSLPVPYKLPVSLSVGSCVIIKGTPIHSFINDPQLQVDFYTDM
DEDSDIAFRFRVHFGNHVVMNRREFGIWMLEETTDYVPFEDGKQFELCIYVHYNEYEI
KVNGIRIYGFVHRIPPSFVKMVQVSRDISLTSVCVCN"
BASE COUNT 180 a 139 c 136 g 166 t
ORIGIN
1 agaagactgg actcaattct gaaggtcgcc aagaaggaga gaacaatgtc ttctttaccc
61 gtgccataca aactgcctgt gtctttgtct gttggttcct gcgtgataat caaagggaca
121 ccaatccact cttttatcaa tgacccacag ctgcaggtgg atttctacac tgacatggat
181 gaggattcag atattgcctt ccgtttccga gtgcactttg gcaatcatgt ggtcatgaac
241 aggcgtgagt ttgggatatg gatgttggag gagacaacag actacgtgcc ctttgaggat
301 ggcaaacaat ttgagctgtg catctacgta cattacaatg agtatgagat aaaggtcaat
361 ggcatacgca tttacggctt tgtccatcga atcccgccat catttgtgaa gatggtgcaa
421 gtgtcgagag atatctccct gacctcagtg tgtgtctgca attgagggag atgatcacac
481 tcctcattgt tgaggaatcc ctctttctac ctgaccatgg gattcccaga acctgctaac
541 agaataatcc ctgctcacat tttcccctac actttgtcat taaaacagca cgaaaactca
601 caaagaaaaa aaaaaaaaaa a
//