LOCUS BC066293 553 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens ribosomal protein S27a, mRNA (cDNA clone MGC:86974
IMAGE:30336950), complete cds.
ACCESSION BC066293
VERSION BC066293.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 553)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 553)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-FEB-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: j Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27436941.
FEATURES Location/Qualifiers
source 1..553
/db_xref="H-InvDB:HIT000262184"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:86974 IMAGE:30336950"
/tissue_type="Placenta, pre-eclamptic"
/clone_lib="NIH_MGC_148"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..553
/gene="RPS27A"
/gene_synonym="CEP80"
/gene_synonym="HUBCEP80"
/gene_synonym="UBA80"
/gene_synonym="UBCEP1"
/db_xref="GeneID:6233"
/db_xref="HGNC:HGNC:10417"
/db_xref="MIM:191343"
CDS 39..509
/gene="RPS27A"
/gene_synonym="CEP80"
/gene_synonym="HUBCEP80"
/gene_synonym="UBA80"
/gene_synonym="UBCEP1"
/codon_start=1
/product="ribosomal protein S27a"
/protein_id="AAH66293.1"
/db_xref="GeneID:6233"
/db_xref="HGNC:HGNC:10417"
/db_xref="MIM:191343"
/translation="MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAV
LKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK"
BASE COUNT 183 a 104 c 132 g 134 t
ORIGIN
1 cttttcgatc cgccatctgc ggtggagccg ccaccaaaat gcagattttc gtgaaaaccc
61 ttacggggaa gaccatcacc ctcgaggttg aaccctcgga tacgatagaa aatgtaaagg
121 ccaagatcca ggataaggaa ggaattcctc ctgatcagca gagactgatc tttgctggca
181 agcagctgga agatggacgt actttgtctg actacaatat tcaaaaggag tctactcttc
241 atcttgtgtt gagacttcgt ggtggtgcta agaaaaggaa gaagaagtct tacaccactc
301 ccaagaagaa taagcacaag agaaagaagg ttaagctggc tgtcctgaaa tattataagg
361 tggatgagaa tggcaaaatt agtcgccttc gtcgagagtg cccttctgat gaatgtggtg
421 ctggggtgtt tatggcaagt cactttgaca gacattattg tggcaaatgt tgtctgactt
481 actgtttcaa caaaccagaa gacaagtaac tgtatgagtt aataaaagac atgaactaaa
541 aaaaaaaaaa aaa
//