LOCUS BC065936 2217 bp mRNA linear HUM 13-SEP-2006
DEFINITION Homo sapiens ST3 beta-galactoside alpha-2,3-sialyltransferase 5,
mRNA (cDNA clone MGC:74435 IMAGE:6163586), complete cds.
ACCESSION BC065936
VERSION BC065936.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2217)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2217)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-FEB-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: n Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28373079.
FEATURES Location/Qualifiers
source 1..2217
/db_xref="H-InvDB:HIT000262114"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74435 IMAGE:6163586"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2217
/gene="ST3GAL5"
/gene_synonym="SIATGM3S"
/gene_synonym="ST3GalV"
/db_xref="GeneID:8869"
/db_xref="HGNC:HGNC:10872"
/db_xref="MIM:604402"
CDS 46..1302
/gene="ST3GAL5"
/gene_synonym="SIATGM3S"
/gene_synonym="ST3GalV"
/codon_start=1
/product="ST3 beta-galactoside alpha-2,3-sialyltransferase
5"
/protein_id="AAH65936.2"
/db_xref="GeneID:8869"
/db_xref="HGNC:HGNC:10872"
/db_xref="MIM:604402"
/translation="MRTKAAGCAERRPLQPRTEAAAAPAGRAMPSEYTYVKLRSDCSR
PSLQWYTRAQSKMRRPSLLLKDILKCTLLVFGVWILYILKLNYTTEECDMKKMHYVDP
DRVKRAQKYAQQVLQKECRPKFAKTSMALLFEHRYSVDLLPFVQKAPKDSEAESKYDP
PFGFRKFSSKVQTLLELLPEHDLPEHLKAKTCRRCVVIGSGGILHGLELGHTLNQFDV
VIRLNSAPVEGYSEHVGNKTTIRMTYPEGAPLSDLEYYSNDLFVAVLFKSVDFNWLQA
MVKKETLPFWVRLFFWKQVAEKIPLQPKHFRILNPVIIKETAFDILQYSEPQSRFWGR
DKNVPTIGVIAVVLATHLCDEVSLAGFGYDLNQPRTPLHYFDSQCMAAMNFQTMHNVT
TETKFLLKLVKEGVVKDLSGGIDREF"
BASE COUNT 609 a 486 c 521 g 601 t
ORIGIN
1 gcgcggggta ccgggctggc ggccggccgg cgccccctca ttagtatgcg gacgaaggcg
61 gcgggctgcg cggagcggcg tcccctgcag ccgcggaccg aggcagcggc ggcacctgcc
121 ggccgagcaa tgccaagtga gtacacctat gtgaaactga gaagtgattg ctcgaggcct
181 tccctgcaat ggtacacccg agctcaaagc aagatgagaa ggcccagctt gttattaaaa
241 gacatcctca aatgtacatt gcttgtgttt ggagtgtgga tcctttatat cctcaagtta
301 aattatacta ctgaagaatg tgacatgaaa aaaatgcatt atgtggaccc tgaccgtgta
361 aagagagctc agaaatatgc tcagcaagtc ttgcagaagg aatgtcgtcc caagtttgcc
421 aagacatcaa tggcgctgtt atttgagcac aggtatagcg tggacttact cccttttgtg
481 cagaaggccc ccaaagacag tgaagctgag tccaagtacg atcctccttt tgggttccgg
541 aagttctcca gtaaagtcca gaccctcttg gaactcttgc cagagcacga cctccctgaa
601 cacttgaaag ccaagacctg tcggcgctgt gtggttattg gaagcggagg aatactgcac
661 ggattagaac tgggccacac cctgaaccag ttcgatgttg tgataaggtt aaacagtgca
721 ccagttgagg gatattcaga acatgttgga aataaaacta ctataaggat gacttatcca
781 gagggcgcac cactgtctga ccttgaatat tattccaatg acttatttgt tgctgtttta
841 tttaagagtg ttgatttcaa ctggcttcaa gcaatggtaa aaaaggaaac cctgccattc
901 tgggtacgac tcttcttttg gaagcaggtg gcagaaaaaa tcccactgca gccaaaacat
961 ttcaggattt tgaatccagt tatcatcaaa gagactgcct ttgacatcct tcagtactca
1021 gagcctcagt caaggttctg gggccgagat aagaacgtcc ccacaatcgg tgtcattgcc
1081 gttgtcttag ccacacatct gtgcgatgaa gtcagtttgg cgggttttgg atatgacctc
1141 aatcaaccca gaacaccttt gcactacttc gacagtcaat gcatggctgc tatgaacttt
1201 cagaccatgc ataatgtgac aacggaaacc aagttcctct taaagctggt caaagaggga
1261 gtggtgaaag atctcagtgg aggcattgat cgtgaatttt gaacacagaa aacctcagtt
1321 gaaaatgcaa ctctaactct gagagctgtt tttgacagcc ttcttgatgt atttctccat
1381 cctgcagata ctttgaagtg cagctcatgt ttttaacttt taatttaaaa acacaaaaaa
1441 aattttagct cttcccactt tttttttcct atttatttga ggtcagtgtt tgtttttgca
1501 caccattttg taaatgaaac ttaagaattg aattggaaag acttctcaaa gagaattgta
1561 tgtaacgatg ttgtattgat ttttaagaaa gtaatttaat ttgtaaaact tctgctcgtt
1621 tacactgcac attgaataca ggtaactaat tggaaggaga ggggaggtca ctcttttgat
1681 ggtggccctg aacctcattc tggttccctg ctgcgctgct tggtgtgacc cacggaggat
1741 ccactcccag gatgacgtgc tccgtagctc tgctgctgat actgggtctg cgatgcagcg
1801 gcgtgaggcc tgggctggtt ggagaaggtc acaacccttc tctgttggtc tgccttctgc
1861 tgaaagactc gagaaccaac cagggaagct gtcctggagg tccctggtcg gagagggaca
1921 tagaatctgt gacctctgac aactgtgaag ccaccctggg ctacagaaac cacagtcttc
1981 ccagcaatta ttacaattct tgaattcctt ggggattttt tactgccctt tcaaagcact
2041 taagtgttag atctaacgtg ttccagtgtc tgtctgaggt gacttaaaaa atcagaacaa
2101 aacttctatt atccagagtc atgggagagt acaccctttc caggaataat gttttgggaa
2161 acactgaaat gaaatcttcc cagtattata aattgtgtat ttaaaaaaaa aaaaaaa
//