LOCUS BC065721 813 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens lipocalin 1 (tear prealbumin), mRNA (cDNA clone
MGC:71975 IMAGE:30330221), complete cds.
ACCESSION BC065721
VERSION BC065721.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 813)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 813)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein and Dr. Miklos Palkovits
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: b Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32455234.
FEATURES Location/Qualifiers
source 1..813
/db_xref="H-InvDB:HIT000262002"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71975 IMAGE:30330221"
/tissue_type="Glandular pool- thyroid, parathyroid,
adrenal cortex, pineal gland, submandibular gland."
/clone_lib="NIH_MGC_184"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..813
/gene="LCN1"
/gene_synonym="PMFA"
/gene_synonym="TP"
/gene_synonym="VEGP"
/db_xref="GeneID:3933"
/db_xref="HGNC:HGNC:6525"
/db_xref="MIM:151675"
CDS 63..593
/gene="LCN1"
/gene_synonym="PMFA"
/gene_synonym="TP"
/gene_synonym="VEGP"
/codon_start=1
/product="lipocalin 1 (tear prealbumin)"
/protein_id="AAH65721.1"
/db_xref="GeneID:3933"
/db_xref="HGNC:HGNC:6525"
/db_xref="MIM:151675"
/translation="MKPLLLAVSLGLIAALQAHHLLASDEEIQDVSGTWYLKAMTVDR
EFPEMNLESVTPMTLTTLEGGNLEAKVTMLISGRCQEVKAVLEKTDEPGKYTADGGKH
VAYIIRSHVKDHYIFYCEGELHGKPVRGVKLVGRDPKNNLEALEDFEKAAGARGLSTE
SILIPRQSETCSPGSD"
BASE COUNT 205 a 255 c 233 g 120 t
ORIGIN
1 ggggagcctc tcccagcccc agcaagcgac ctgtcaggcg gccgtggact cagactccgg
61 agatgaagcc cctgctcctg gccgtcagcc ttggcctcat tgctgccctg caggcccacc
121 acctcctggc ctcagacgag gagattcagg atgtgtcagg gacgtggtat ctgaaggcca
181 tgacggtgga cagggagttc cctgagatga atctggaatc ggtgacaccc atgaccctca
241 cgaccctgga agggggcaac ctggaagcca aggtcaccat gctgataagt ggccggtgcc
301 aggaggtgaa ggccgtcctg gagaaaactg acgagccggg aaaatacacg gccgacgggg
361 gcaagcacgt ggcatacatc atcaggtcgc acgtgaagga ccactacatc ttttactgtg
421 agggcgagct gcacgggaag ccggtccgag gggtgaagct cgtgggcaga gaccccaaga
481 acaacctgga agccttggag gactttgaga aagccgcagg agcccgcgga ctcagcacgg
541 agagcatcct catccccagg cagagcgaaa cctgctctcc agggagcgat taggggcagg
601 ggacaccttg gctcctcagc agcccaagga cggcaccatc cagcacctcc gtcattcaca
661 gggacatgga aaaagctccc cacccctgca gaacgcggct ggctgcaccc cttcctacca
721 ccccccgcct tccccctgcc ctgcgccccc tctcctggtt ctccataaag agcttcagca
781 gccaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//