LOCUS BC065559 1145 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Thy-1 cell surface antigen, mRNA (cDNA clone MGC:74728
IMAGE:6137513), complete cds.
ACCESSION BC065559
VERSION BC065559.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1145)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1145)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: h Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923361.
FEATURES Location/Qualifiers
source 1..1145
/db_xref="H-InvDB:HIT000261965"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74728 IMAGE:6137513"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1145
/gene="THY1"
/gene_synonym="CD90"
/db_xref="GeneID:7070"
/db_xref="HGNC:HGNC:11801"
/db_xref="MIM:188230"
CDS 57..542
/gene="THY1"
/gene_synonym="CD90"
/codon_start=1
/product="Thy-1 cell surface antigen"
/protein_id="AAH65559.1"
/db_xref="GeneID:7070"
/db_xref="HGNC:HGNC:11801"
/db_xref="MIM:188230"
/translation="MNLAISIALLLTVLQVSRGQKVTSLTACLVDQSLRLDCRHENTS
SSPIQYEFSLTRETKKHVLFGTVGVPEHTYRSRTNFTSKYNMKVLYLSAFTSKDEGTY
TCALHHSGHSPPISSQNVTVLRDKLVKCEGISLLAQNTSWLLLLLLSLSLLQATDFMS
L"
BASE COUNT 258 a 346 c 299 g 242 t
ORIGIN
1 ggaggctgca gcagcggaag accccagtcc agatccagga ctgagatccc agaaccatga
61 acctggccat cagcatcgct ctcctgctaa cagtcttgca ggtctcccga gggcagaagg
121 tgaccagcct aacggcctgc ctagtggacc agagccttcg tctggactgc cgccatgaga
181 ataccagcag ttcacccatc cagtacgagt tcagcctgac ccgtgagaca aagaagcacg
241 tgctctttgg cactgtgggg gtgcctgagc acacataccg ctcccgaacc aacttcacca
301 gcaaatacaa catgaaggtc ctctacttat ccgccttcac tagcaaggac gagggcacct
361 acacgtgtgc actccaccac tctggccatt ccccacccat ctcctcccag aacgtcacag
421 tgctcagaga caaactggtc aagtgtgagg gcatcagcct gctggctcag aacacctcgt
481 ggctgctgct gctcctgctc tccctctccc tcctccaggc cacggatttc atgtccctgt
541 gactggtggg gcccatggag gagacaggaa gcctcaagtt ccagtgcaga gatcctactt
601 ctctgagtca gctgaccccc tccccccaat ccctcaaacc ttgaggagaa gtggggaccc
661 cacccctcat caggagttcc agtgctgcat gcgattatct acccacgtcc acgcggccac
721 ctcaccctct ccgcacacct ctggctgtct ttttgtactt tttgttccag agctgcttct
781 gtctggttta tttaggtttt atccttcctt ttctttgaga gttcgtgaag agggaagcca
841 ggattgggga cctgatggag agtgagagca tgtgaggggt agtgggatgg tggggtacca
901 gccactggag gggtcatcct tgcccatcgg gaccagaaac ctgggagaga cttggatgag
961 gagtggttgg gctgtgcctg ggcctagcac ggacatggtc tgtcctgaca gcactcctcg
1021 gcaggcatgg ctggtgcctg aagaccccag atgtgagggc accaccaaga atttgtggcc
1081 taccttgtga gggagagaac tgagcatctc cagcattctc agccacaacc aaaaaaaaaa
1141 aaaaa
//