LOCUS BC065371 1083 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens Rho GTPase-activating protein, mRNA (cDNA clone
IMAGE:6259117), partial cds.
ACCESSION BC065371
VERSION BC065371.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1083)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1083)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (20-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: l Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29469070.
FEATURES Location/Qualifiers
source 1..1083
/db_xref="H-InvDB:HIT000261877"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6259117"
/tissue_type="Skin, melanoma, melanotic"
/clone_lib="NIH_MGC_112"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1083
/gene="RICS"
/gene_synonym="GC-GAP"
/gene_synonym="GRIT"
/gene_synonym="KIAA0712"
/gene_synonym="MGC1892"
/gene_synonym="p200RhoGAP"
/gene_synonym="p250GAP"
/db_xref="GeneID:9743"
/db_xref="MIM:608541"
CDS <1..986
/gene="RICS"
/gene_synonym="GC-GAP"
/gene_synonym="GRIT"
/gene_synonym="KIAA0712"
/gene_synonym="MGC1892"
/gene_synonym="p200RhoGAP"
/gene_synonym="p250GAP"
/codon_start=3
/product="RICS protein"
/protein_id="AAH65371.1"
/db_xref="GeneID:9743"
/db_xref="MIM:608541"
/translation="LHLCIYDRRFSQLSELPRSDTLKDSPESVTQMLMAYLSRLSAIA
GNKINCGPALTWMEIDNKGNHLLVHEESSINTPAVGAAHVIKRYTARAPDELTLEVGD
IVSVIDMPPKVLSTWWRGKHGFQVGLFPGHCVELINQKVPQSVTNSVPKPVSKKHGKL
ITFLRTFMKSRPTKQKLKQRGILKERVFGCDLGEHLLNSGFEVPQVLQSCTAFIERYG
IVDGIYRLSGVASNIQRLRHEFDSEHVPDLTKEPYVQDIHSVGSLCKLYFRELPNPLL
TYQLYEKFSDAVSAATDEERLIKIHDVIQQLPPPHYRSATVGKYQAEVEVG"
BASE COUNT 297 a 262 c 240 g 284 t
ORIGIN
1 atcttcatct gtgtatttat gaccgaagat tttcccagct ctcagaactt ccccgttctg
61 acaccctgaa ggacagtcca gagtcggtca ctcagatgct tatggcttac ctgtcacgcc
121 tttcagctat cgctggcaac aagatcaact gtgggcccgc ccttacctgg atggagattg
181 ataataaggg aaatcacctt ttggttcatg aggagtcatc catcaacact cctgctgtcg
241 gtgctgccca tgttatcaag aggtacactg ctcgggcccc tgacgaactg accttagagg
301 tgggagacat tgtttctgtt attgacatgc ccccgaaagt gttaagcaca tggtggagag
361 gcaagcacgg attccaggtg ggactcttcc ctggacactg tgttgagtta attaaccaaa
421 aagttcccca gtcagtgacc aactcagtgc caaaaccagt gtctaaaaag cacggcaagc
481 tcattacgtt cttacgaaca ttcatgaagt ctcgtccaac aaaacagaag ctgaagcagc
541 ggggaatctt gaaagagagg gtgtttggtt gtgacctggg ggagcacctt ctaaattctg
601 gttttgaagt gccgcaggtt cttcaaagct gcacagcatt cattgagaga tatggcatcg
661 tggatggaat ctatcgcctt tctggtgttg cctccaatat ccagagacta cgccatgaat
721 ttgactctga gcacgtcccc gacctgacga aagaaccgta tgttcaggac atccattctg
781 tgggttccct atgtaagctg tacttccggg aactcccaaa ccctctgctt acctaccagc
841 tgtatgagaa attttctgat gcagtttcag cagcaacaga tgaagaaagg ctgataaaaa
901 tccacgatgt catccagcag ctccccccac cacactacag gtcagccaca gtgggtaaat
961 accaggcaga ggtagaagtc ggttgacctg taaacgtttt tttttccttt ggatttctat
1021 ttaaacttcc ttggagttct aattaaactt ccatttcata tataaaaaaa aaaaaaaaaa
1081 aaa
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