LOCUS BC065270 959 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens apolipoprotein C-II, mRNA (cDNA clone MGC:75082
IMAGE:6165425), complete cds.
ACCESSION BC065270
VERSION BC065270.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 959)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 959)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (12-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: n Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32130517.
FEATURES Location/Qualifiers
source 1..959
/db_xref="H-InvDB:HIT000261833"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:75082 IMAGE:6165425"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..959
/gene="APOC2"
/db_xref="GeneID:344"
/db_xref="MIM:608083"
CDS 195..413
/gene="APOC2"
/codon_start=1
/product="APOC2 protein"
/protein_id="AAH65270.1"
/db_xref="GeneID:344"
/db_xref="MIM:608083"
/translation="MGTRLLPALFLVLLVLGFEVQGTQQPQQDEMPSPTFLTQVKESL
SSYWESAKTAAQNLYEKTYLPAVDEKLR"
BASE COUNT 233 a 344 c 210 g 172 t
ORIGIN
1 cagaatgttg gaaagtgagg cccaagaagg gggctgtgtc caagtccatg catgggaaac
61 ttgactggga caccgagcac acacagagca ggatctcagt cccccccacc agagtggggc
121 gtgaccacag gaacagccgc ctccagtcag cctgccacat gacaccccct caatgttcca
181 ggtctctgga cactatgggc acacgactcc tcccagctct gtttcttgtc ctcctggtat
241 tgggatttga ggtccagggg acccaacagc cccagcaaga tgagatgcct agcccgacct
301 tcctcaccca ggtgaaggaa tctctctcca gttactggga gtcagcaaag acagccgccc
361 agaacctgta cgagaagaca tacctgcccg ctgtagatga gaaactcagg tagcacctgc
421 ccctggagaa atggggtctg gcccatacca ccgactgcat ccaggaccca gaagttcagg
481 ccccagcccc tcctccctca gacccaggag tccaggcctc agcccctcct ccctcagacc
541 caggagtcca ggcccccagc ccctcttcct ccctcagacc caggagtcca ggcccccagc
601 ccctcctccc tcagacccag gagtccaggc ccccagaccc tcctccctca gacccaggag
661 tccaggcccc cagcccctcc tccctctaac catctgtgct ttctccccag ggacttgtac
721 agcaaaagca cagcagccat gagcacttac acaggcattt ttactgacca agttctttct
781 gtgctgaagg gagaggagta acagccagac cccccatcag tggacaaggg gagagtcccc
841 tactcccctg atcccccagg ttcagactga gctccccctt cccagtagct cttgcatcct
901 cctcccaact ctagcctgaa ttcttttcaa taaaaaatac aattcaaaaa aaaaaaaaa
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