LOCUS BC065207 2500 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ATPase, H+ transporting, lysosomal 38kDa, V0 subunit
d2, mRNA (cDNA clone MGC:70491 IMAGE:5190344), complete cds.
ACCESSION BC065207
VERSION BC065207.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2500)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2500)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 135 Row: f Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22749164.
FEATURES Location/Qualifiers
source 1..2500
/db_xref="H-InvDB:HIT000261770"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:70491 IMAGE:5190344"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2500
/gene="ATP6V0D2"
/gene_synonym="ATP6D2"
/gene_synonym="FLJ38708"
/gene_synonym="VMA6"
/db_xref="GeneID:245972"
/db_xref="HGNC:HGNC:18266"
CDS 76..1128
/gene="ATP6V0D2"
/gene_synonym="ATP6D2"
/gene_synonym="FLJ38708"
/gene_synonym="VMA6"
/codon_start=1
/product="ATPase, H+ transporting, lysosomal 38kDa, V0
subunit d2"
/protein_id="AAH65207.1"
/db_xref="GeneID:245972"
/db_xref="HGNC:HGNC:18266"
/translation="MLEGAELYFNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLED
LKIHLQTTDYGNFLANHTNPLTVSKIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTC
SYMIDNVILLMNGALQKKSVKEILGKCHPLGRFTEMEAVNIAETPSDLFNAILIETPL
APFFQDCMSENALDELNIELLRNKLYKSYLEAFYKFCKNHGDVTAEVMCPILEFEADR
RAFIITLNSFGTELSKEDRETLYPTFGKLYPEGLRLLAQAEDFDQMKNVADHYGVYKP
LFEAVGGSGGKTLEDVFYEREVQMNVLAFNRQFHYGVFYAYVKLKEQEIRNIVWIAEC
ISQRHRTKINSYIPIL"
BASE COUNT 766 a 533 c 476 g 725 t
ORIGIN
1 gctagtgcaa atcttcaggg gccgtccagg actacagagc tgtttcaccc taccttggct
61 tcaatctctt cccccatgct cgaaggtgcg gagctgtact tcaacgtgga ccatggctac
121 ctggagggcc tggttcgagg atgcaaggcc agcctcctga cccagcaaga ctatatcaac
181 ctggtccagt gtgagaccct agaagacctg aaaattcatc tccagactac tgattatggt
241 aactttttgg ctaatcacac aaatcctctt actgtttcca aaattgacac tgagatgagg
301 aaaagactat gtggagaatt tgagtatttc cggaatcatt ccctggagcc cctcagcaca
361 tttctcacct atatgacgtg cagttatatg atagacaatg tgattctgct gatgaatggt
421 gcattgcaga aaaaatctgt gaaagaaatt ctggggaagt gccacccctt gggccgtttc
481 acagaaatgg aagctgtcaa cattgcagag acaccttcag atctctttaa tgccattctg
541 atcgaaacgc cattagctcc attcttccaa gactgcatgt ctgaaaatgc tctagatgaa
601 ctgaatattg aattgctacg caataaacta tacaagtctt accttgaggc attctataaa
661 ttctgtaaga atcatggtga tgtcacagca gaagttatgt gtcccattct tgagtttgag
721 gccgacagac gtgcttttat catcactctt aactcctttg gcactgaatt gagcaaagaa
781 gaccgagaga ccctctatcc aaccttcggc aaactctatc ctgaggggtt gcggctgttg
841 gctcaagcag aagactttga ccagatgaag aacgtagcgg atcattacgg agtatacaaa
901 cctttatttg aagctgtagg tggcagtggg ggaaagacat tggaggacgt gttttacgag
961 cgtgaggtac aaatgaatgt gctggcattc aacagacagt tccactacgg tgtgttttat
1021 gcatatgtaa agctgaagga acaggaaatt agaaatattg tgtggatagc agaatgtatt
1081 tcacagaggc atcgaactaa aatcaacagt tacattccaa ttttataacc caagtaaggt
1141 tctcaaatgt agaaaattat aaatgttaaa aggaagttat tgaagaaaat aaaagaaatt
1201 atgttatatt atctagacta cacaaaagta agccacacta tatcttcatg agttgcaaat
1261 ccatggaaac acagtaaacc agccctgaaa caaagcattt ccttgttttc agtggtatta
1321 gatcttgttt ccacatgtct gtctcattct tcactgggcc ttacaggtta gttttaatta
1381 actctatggt atttttctta ttcttgtttg atcatgttaa aaattggacc taataaaagt
1441 attttattct tgcttttcca tgcttctcta caggtccaaa tactgaatgt ctcctttact
1501 ttttctcttt taaatttttt tctagacagg gtctcactct gtcacctagg ctacagtgca
1561 gtggtgtgat cacagctcac tgcagcctcg acttcccagg ctcaagtgat cctcccagct
1621 ctcagcctcc aaagtagctg gcactacaag tgtacacccc cacacaaggc taagttttgt
1681 attttttgta gagacagggt ttcaacatat tatccaggct ggtgtcgaat tcctgggctc
1741 cagggatcca cagtccccct tggcctccca aagtgttggg attacatgca tgagccactg
1801 tgctgggctt catttacatt ttaactgtct gttccttgcc tagattcaca gaaatccaaa
1861 gctgtatgta gtcaacatgg ttcacaagtg ttggaaaatg tgttttttgt tttgttttgt
1921 tttgtttcgt tttgttttga gacagagttt ccctctgtcg cccaggctag agtgcaatgg
1981 cgtgatctcg gctcactgca acctccacct cccagattca agcaactctc tgcctcagcc
2041 tcccgagtag ctgggattac aagcacccac cactacactc agctaatttt ttgtattttt
2101 agtagagccg gggtttcacc atcttggcca ggctgatctt gaactcctga gctcatgatc
2161 cacccgcctc agcctcccaa agtgctggga ttacaggccc cttgttcagc cactgcacct
2221 ggccccttat tttgtttttg ttttctaata tactttgatg taatcagctt gagaaagcaa
2281 cacaatttca aatcctatct tctagatgca agcagtgtta aatttgttaa taaatttgct
2341 tttcacacct ttctttaaat aaaaggtata tctctcttta aaaaaaaaaa aaaaaaaaaa
2401 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2461 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//