LOCUS BC065029 2478 bp mRNA linear HUM 13-JAN-2004
DEFINITION Homo sapiens bromodomain adjacent to zinc finger domain, 1B, mRNA
(cDNA clone IMAGE:6066431), partial cds.
ACCESSION BC065029
VERSION BC065029.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2478)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2478)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: f Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14670391.
FEATURES Location/Qualifiers
source 1..2478
/db_xref="H-InvDB:HIT000261732"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6066431"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>2478
/gene="BAZ1B"
/gene_synonym="WBSCR10"
/gene_synonym="WBSCR9"
/gene_synonym="WSTF"
/db_xref="GeneID:9031"
/db_xref="MIM:605681"
CDS 55..>2478
/gene="BAZ1B"
/gene_synonym="WBSCR10"
/gene_synonym="WBSCR9"
/gene_synonym="WSTF"
/codon_start=1
/product="BAZ1B protein"
/protein_id="AAH65029.1"
/db_xref="GeneID:9031"
/db_xref="MIM:605681"
/translation="MAPLLGRKPFPLVKPLPGEEPLFTIPHTQEAFRTREEYEARLER
YSERIWTCKSTGSSQLTHKEAWEEEQEVAELLKEEFPAWYEKLVLEMVHHNTASLEKL
VDTAWLEIMTKYAVGEECDFEVGKEKMLKVKIVKIHPLEKVDEEATEKKSDGACDSPS
SDKENSSQIAQDHQKKETVVKEDEGRRESINDRARRSPRKLPTSLKKGERKWAPPKFL
PHKYDVKLQNEDKIISNVPADSLIRTERPPNKEIVRYFIRHNALRAGTGENAPWVVED
ELVKKYSLPSKFSDFLLDPYKYMTLNPSTKRKNTGSPDRKPSKKSKTDNSSLSSPLNP
KLWCHVHLKKSLSGSPLKVKNSKNSKSPEEHLEEMMKMMSPNKLHTNFHIPKKGPPAK
KPGKHSDKPLKAKGRSKGILNGQKSTGNSKSPKKGLKTPKTKMKQMTLLDMAKGTQKM
TRAPRNSGGTPRTSSKPHKHLPPAALHLIAYYKENKDREDKRSALSCVISKTARLLSS
EDRARLPEELRSLVQKRYELLEHKKRWASMSEEQRKEYLKKKREELKKKLKEKAKERR
EKEMLERLEKQKRYEDQELTGKNLPAFRLVDTPEGLPNTLFGDVAMVVEFLSCYSGLL
LPDAQYPITAVSLMEALSADKGGFLYLNRVLVILLQTLLQDEIAEDYGELGMKLSEIP
LTLHSVSELVRLCLRRSDVQEESEGSDTDDNKDSAAFEDNEVQDEFLEKLETSEFFEL
TSEEKLQILTALCHRILMTYSVQDHMETRQQMSAELWKERLAVLKEENDKKRAEKQKR
KEMEAKKKKK"
misc_feature 1864..2058
/gene="BAZ1B"
/gene_synonym="WBSCR10"
/gene_synonym="WBSCR9"
/gene_synonym="WSTF"
/note="DDT; Region: domain in different transcription and
chromosome remodeling factors"
/db_xref="CDD:smart00571"
BASE COUNT 803 a 521 c 630 g 524 t
ORIGIN
1 gcgggagctc tgcgccgtgg cgttccgctc catgactgtc gcgccgccgc cgcgatggcg
61 ccgctcctgg gccgcaagcc cttcccgctg gtgaagccgt tgcccggaga ggagccgctc
121 ttcaccatcc cgcacactca ggaggccttc cgcacccggg aagagtatga agcccgcttg
181 gaaaggtaca gtgagcgcat ttggacgtgc aagagtactg gaagcagtca gctaacacac
241 aaggaagcct gggaggaaga acaggaagtt gctgagcttt tgaaggagga gtttcctgcc
301 tggtatgaga agcttgttct ggaaatggtt caccataaca cagcctcctt agagaagtta
361 gtagatactg cttggttgga gatcatgacc aaatatgctg tgggagaaga gtgtgacttc
421 gaggttggga aggagaaaat gctcaaggtg aagattgtga agattcatcc tttggagaaa
481 gtggatgaag aggccactga gaagaaatct gatggtgcct gtgattctcc atcaagtgac
541 aaagagaact ccagtcagat tgctcaggac catcagaaga aggagacagt tgtgaaagag
601 gatgaaggaa ggagagagag tattaatgac agagcacgta gatcgccacg aaaacttcct
661 acttcattaa aaaaaggaga aaggaaatgg gctcctccaa aatttctgcc tcacaaatat
721 gatgtgaaac tacaaaatga agataagatc atcagtaacg tgccagcaga cagcttgatt
781 cgtacagagc gcccaccaaa taaggagata gttcgatact ttatacggca taatgcatta
841 cgagctggta ctggtgaaaa tgcaccttgg gtcgtagaag atgaattggt gaagaaatac
901 tctctgccca gcaagttcag tgacttttta cttgatccat acaagtatat gactctcaac
961 ccttctacta agaggaagaa tactggatcc ccagacagga agccctcaaa gaaatccaag
1021 acagacaact cttctcttag ttcaccacta aatcctaagt tatggtgtca cgtacacttg
1081 aagaagtcat tgagtggctc gccactcaaa gtgaagaact caaagaattc caaatctcct
1141 gaagaacatc tagaagaaat gatgaagatg atgtcgccca ataagctgca cactaacttt
1201 cacattccta aaaaaggccc acctgccaag aaaccaggga agcacagtga caagcctttg
1261 aaggcaaagg gcagaagcaa aggcatcctg aatggacaga aatccacagg gaattccaaa
1321 tctcccaaaa aaggactgaa gactcctaaa accaaaatga agcagatgac tttgttggat
1381 atggccaaag gcacgcagaa gatgacacga gccccacgga attctggggg tacacctagg
1441 acctctagta aacctcataa acatctgcct cctgcagccc tacacctcat tgcatactac
1501 aaagaaaaca aagacaggga ggacaagagg agcgccctgt cctgtgttat ctccaaaaca
1561 gctcgtcttc tctctagtga agatagagct cgtctcccag aagaattgcg aagtcttgtt
1621 caaaaacgct atgaacttct agagcacaaa aagaggtggg cttctatgtc tgaagaacaa
1681 cggaaagaat atttgaaaaa gaaacgggag gagctgaaaa agaagttgaa ggaaaaagcc
1741 aaagaacgaa gagagaaaga aatgcttgag agattagaaa aacagaagcg gtatgaggac
1801 caagagttaa ctggcaaaaa ccttccagca ttcagattgg tggatacccc tgaagggctg
1861 cccaacacgc tgtttgggga tgtggccatg gtggtggaat tcttgagctg ttattctggg
1921 ctacttttac cagatgctca gtatcctatt actgctgtgt cccttatgga agccttgagt
1981 gcagataagg gtggcttttt ataccttaac agggtgttgg tcatcctctt acagaccctc
2041 ctacaagatg agatagcaga agactatggt gaattgggaa tgaagctgtc ggaaatcccc
2101 ttgactctgc attctgtttc agagctggtg cggctctgct tgcgcagatc tgatgttcag
2161 gaggaaagcg agggctcaga cacagatgac aataaagatt cagctgcatt tgaggataat
2221 gaggtacaag atgagttcct agaaaagctg gagacctctg aattttttga gctgacgtca
2281 gaggagaagc tacagatctt gacagcactg tgccaccgga tcctcatgac atactcagtg
2341 caagaccaca tggagaccag acagcagatg tctgcagagt tgtggaagga acggcttgct
2401 gtgttgaagg aagaaaatga taagaagaga gcagagaaac agaaacggaa agaaatggaa
2461 gccaaaaaaa aaaaaaaa
//